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    GALNT13 polypeptide N-acetylgalactosaminyltransferase 13 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696337, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GALNT13provided by VGNC
    Official Full Name
    polypeptide N-acetylgalactosaminyltransferase 13provided by VGNC
    Primary source
    VGNC:VGNC:104531
    See related
    Ensembl:ENSMMUG00000055468
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GALNT13 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (40950659..41548059)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (40473134..41113610)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene 60S acidic ribosomal protein P0 pseudogene Neighboring gene dnaJ homolog subfamily A member 1 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene prohibitin pseudogene Neighboring gene uncharacterized LOC114671330 Neighboring gene potassium inwardly rectifying channel subfamily J member 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polypeptide N-acetylgalactosaminyltransferase 13
    Names
    UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      40950659..41548059
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028830721.1 → XP_028686554.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X4

      UniProtKB/TrEMBL
      H9EMA7
      Related
      ENSMMUP00000069522.1, ENSMMUT00000107633.1
      Conserved Domains (2) summary
      cd02510
      Location:118 → 418
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:431 → 547
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

    2. XM_028830718.1 → XP_028686551.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1

      Conserved Domains (2) summary
      cd02510
      Location:133 → 433
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:446 → 563
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

    3. XM_028830720.1 → XP_028686553.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X3

      Conserved Domains (2) summary
      cd02510
      Location:133 → 433
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:446 → 562
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

    4. XM_028830719.1 → XP_028686552.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QMU1
      Related
      ENSMMUP00000049366.2, ENSMMUT00000074894.2
      Conserved Domains (2) summary
      cd02510
      Location:118 → 418
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:431 → 548
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

    5. XM_028830717.1 → XP_028686550.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1

      Conserved Domains (2) summary
      cd02510
      Location:133 → 433
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:446 → 563
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

    6. XM_028830723.1 → XP_028686556.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X5

      Conserved Domains (2) summary
      cd02510
      Location:59 → 359
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:372 → 489
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

    7. XM_028830722.1 → XP_028686555.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X5

      Conserved Domains (2) summary
      cd02510
      Location:59 → 359
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:372 → 489
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    Nucleotide Protein
    Heading Accession and Version

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