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    SNCAIP synuclein alpha interacting protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700372, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SNCAIPprovided by VGNC
    Official Full Name
    synuclein alpha interacting proteinprovided by VGNC
    Primary source
    VGNC:VGNC:77669
    See related
    Ensembl:ENSMMUG00000009997
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SNCAIP in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (119849996..119997225)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (120017762..120151474)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106998915 Neighboring gene zinc finger protein 474 Neighboring gene zinc finger protein 474 Neighboring gene uncharacterized LOC114678888 Neighboring gene uncharacterized LOC114678887 Neighboring gene arginine-fifty homeobox-like Neighboring gene small nucleolar RNA U13 Neighboring gene sorting nexin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synphilin-1
    Names
    synuclein, alpha interacting protein (synphilin)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      119849996..119997225
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028849689.1 → XP_028705522.1  synphilin-1 isoform X2

      UniProtKB/TrEMBL
      F7CJ93
      Conserved Domains (4) summary
      PHA02874
      Location:422 → 510
      PHA02874; ankyrin repeat protein; Provisional
      sd00045
      Location:349 → 382
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:512 → 555
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain
      pfam12796
      Location:354 → 487
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_028849683.1 → XP_028705516.1  synphilin-1 isoform X1

      UniProtKB/TrEMBL
      A0A5S6RC23, A0A8J8Y2X1, F7CJA4, G7MTU9
      Conserved Domains (4) summary
      PHA02874
      Location:469 → 557
      PHA02874; ankyrin repeat protein; Provisional
      sd00045
      Location:396 → 429
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:559 → 602
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain
      pfam12796
      Location:401 → 534
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_028849684.1 → XP_028705517.1  synphilin-1 isoform X1

      UniProtKB/TrEMBL
      A0A5S6RC23, A0A8J8Y2X1, F7CJA4, G7MTU9
      Conserved Domains (4) summary
      PHA02874
      Location:469 → 557
      PHA02874; ankyrin repeat protein; Provisional
      sd00045
      Location:396 → 429
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:559 → 602
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain
      pfam12796
      Location:401 → 534
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_028849687.1 → XP_028705520.1  synphilin-1 isoform X2

      UniProtKB/TrEMBL
      F7CJ93
      Conserved Domains (4) summary
      PHA02874
      Location:422 → 510
      PHA02874; ankyrin repeat protein; Provisional
      sd00045
      Location:349 → 382
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:512 → 555
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain
      pfam12796
      Location:354 → 487
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_028849691.1 → XP_028705524.1  synphilin-1 isoform X4

      UniProtKB/TrEMBL
      F7CJ86, H9ZFP1
      Related
      ENSMMUP00000034213.3, ENSMMUT00000041177.3
      Conserved Domains (4) summary
      PHA02874
      Location:422 → 510
      PHA02874; ankyrin repeat protein; Provisional
      sd00045
      Location:349 → 382
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:512 → 555
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain
      pfam12796
      Location:354 → 487
      Ank_2; Ankyrin repeats (3 copies)

    6. XM_028849681.1 → XP_028705514.1  synphilin-1 isoform X1

      UniProtKB/TrEMBL
      A0A5S6RC23, A0A8J8Y2X1, F7CJA4, G7MTU9
      Conserved Domains (4) summary
      PHA02874
      Location:469 → 557
      PHA02874; ankyrin repeat protein; Provisional
      sd00045
      Location:396 → 429
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:559 → 602
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain
      pfam12796
      Location:401 → 534
      Ank_2; Ankyrin repeats (3 copies)

    7. XM_028849690.1 → XP_028705523.1  synphilin-1 isoform X3

      Conserved Domains (4) summary
      PHA02874
      Location:469 → 557
      PHA02874; ankyrin repeat protein; Provisional
      sd00045
      Location:396 → 429
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:559 → 602
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain
      pfam12796
      Location:401 → 534
      Ank_2; Ankyrin repeats (3 copies)

    8. XM_028849682.1 → XP_028705515.1  synphilin-1 isoform X1

      UniProtKB/TrEMBL
      A0A5S6RC23, A0A8J8Y2X1, F7CJA4, G7MTU9
      Conserved Domains (4) summary
      PHA02874
      Location:469 → 557
      PHA02874; ankyrin repeat protein; Provisional
      sd00045
      Location:396 → 429
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:559 → 602
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain
      pfam12796
      Location:401 → 534
      Ank_2; Ankyrin repeats (3 copies)

    9. XM_028849688.1 → XP_028705521.1  synphilin-1 isoform X2

      UniProtKB/TrEMBL
      F7CJ93
      Related
      ENSMMUP00000034212.3, ENSMMUT00000041176.3
      Conserved Domains (4) summary
      PHA02874
      Location:422 → 510
      PHA02874; ankyrin repeat protein; Provisional
      sd00045
      Location:349 → 382
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:512 → 555
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain
      pfam12796
      Location:354 → 487
      Ank_2; Ankyrin repeats (3 copies)

    10. XM_028849686.1 → XP_028705519.1  synphilin-1 isoform X1

      UniProtKB/TrEMBL
      A0A5S6RC23, A0A8J8Y2X1, F7CJA4, G7MTU9
      Related
      ENSMMUP00000034211.3, ENSMMUT00000041175.3
      Conserved Domains (4) summary
      PHA02874
      Location:469 → 557
      PHA02874; ankyrin repeat protein; Provisional
      sd00045
      Location:396 → 429
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:559 → 602
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain
      pfam12796
      Location:401 → 534
      Ank_2; Ankyrin repeats (3 copies)

    11. XM_028849693.1 → XP_028705526.1  synphilin-1 isoform X6

      UniProtKB/TrEMBL
      F7CJB0
      Related
      ENSMMUP00000034210.3, ENSMMUT00000041174.3
      Conserved Domains (4) summary
      PHA02874
      Location:122 → 210
      PHA02874; ankyrin repeat protein; Provisional
      sd00045
      Location:49 → 82
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:212 → 255
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain
      pfam12796
      Location:54 → 187
      Ank_2; Ankyrin repeats (3 copies)

    12. XM_028849692.1 → XP_028705525.1  synphilin-1 isoform X5

      Conserved Domains (4) summary
      COG0666
      Location:1 → 194
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:41 → 74
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:204 → 247
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain
      pfam12796
      Location:46 → 179
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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