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    AGER advanced glycosylation end-product specific receptor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717296, updated on 17-Aug-2024

    Summary

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    Official Symbol
    AGERprovided by VGNC
    Official Full Name
    advanced glycosylation end-product specific receptorprovided by VGNC
    Primary source
    VGNC:VGNC:69743
    See related
    Ensembl:ENSMMUG00000018442
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See AGER in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (137321551..137325062)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (33024452..33028409, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene G protein signaling modulator 3 Neighboring gene PBX homeobox 2 Neighboring gene ring finger protein 5 Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 1 Neighboring gene EGF like domain multiple 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complex tissue-specific patterns and distribution of multiple RAGE splice variants in different mammals. López-Díez R, et al. Genome Biol Evol, 2013. PMID 24273313, Free PMC Article
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of p38MAPK cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    advanced glycosylation end product-specific receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205117.1 → NP_001192046.1  advanced glycosylation end product-specific receptor precursor

      See identical proteins and their annotated locations for NP_001192046.1

      Status: VALIDATED

      Source sequence(s)
      GU139413, GU139416, GU139417
      UniProtKB/TrEMBL
      F1ABQ1, F7HEW4
      Related
      ENSMMUP00000024268.3, ENSMMUT00000025934.4
      Conserved Domains (4) summary
      cd00096
      Location:34 → 110
      Ig; Immunoglobulin domain
      smart00408
      Location:250 → 305
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:243 → 314
      IG_like; Immunoglobulin like
      pfam08205
      Location:123 → 218
      C2-set_2; CD80-like C2-set immunoglobulin domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      137321551..137325062
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials