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    FBXL19 F-box and leucine rich repeat protein 19 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712283, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FBXL19provided by VGNC
    Official Full Name
    F-box and leucine rich repeat protein 19provided by VGNC
    Primary source
    VGNC:VGNC:81406
    See related
    Ensembl:ENSMMUG00000003230
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See FBXL19 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (28341834..28369233)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (28734578..28761166)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene cardiotrophin 1 Neighboring gene cardiotrophin 2 Neighboring gene ORAI calcium release-activated calcium modulator 3 Neighboring gene SET domain containing 1A, histone lysine methyltransferase Neighboring gene hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone demethylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein demethylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box/LRR-repeat protein 19

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265720.1 → NP_001252649.1  F-box/LRR-repeat protein 19

      See identical proteins and their annotated locations for NP_001252649.1

      Status: PROVISIONAL

      Source sequence(s)
      JV636234
      UniProtKB/TrEMBL
      A0A1D5RKU6, H9F9P5, I2CX89
      Related
      ENSMMUP00000060940.2, ENSMMUT00000054924.2
      Conserved Domains (5) summary
      pfam02008
      Location:50 → 77
      zf-CXXC; CXXC zinc finger domain
      sd00034
      Location:510 → 533
      LRR_AMN1; leucine-rich repeat [structural motif]
      cd15645
      Location:87 → 148
      PHD_FXL19; PHD finger found in F-box and leucine-rich repeat protein 19 (FBXL19)
      pfam12937
      Location:424 → 465
      F-box-like; F-box-like
      cl28166
      Location:466 → 665
      AMN1; Antagonist of mitotic exit network protein 1

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      28341834..28369233
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015125979.2 → XP_014981465.1  F-box/LRR-repeat protein 19 isoform X1

      UniProtKB/TrEMBL
      H9F9P5
      Conserved Domains (5) summary
      cd09293
      Location:446 → 645
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:490 → 513
      LRR_AMN1; leucine-rich repeat [structural motif]
      cd15645
      Location:67 → 128
      PHD_FXL19; PHD finger found in F-box and leucine-rich repeat protein 19 (FBXL19)
      pfam02008
      Location:30 → 57
      zf-CXXC; CXXC zinc finger domain
      pfam12937
      Location:404 → 445
      F-box-like

    2. XM_028840563.1 → XP_028696396.1  F-box/LRR-repeat protein 19 isoform X2

      UniProtKB/TrEMBL
      H9F9P5
      Conserved Domains (5) summary
      pfam02008
      Location:50 → 77
      zf-CXXC; CXXC zinc finger domain
      sd00034
      Location:467 → 490
      LRR_AMN1; leucine-rich repeat [structural motif]
      cd15645
      Location:87 → 148
      PHD_FXL19; PHD finger found in F-box and leucine-rich repeat protein 19 (FBXL19)
      pfam12937
      Location:381 → 422
      F-box-like
      cl28166
      Location:423 → 622
      AMN1; Antagonist of mitotic exit network protein 1
    Nucleotide Protein
    Heading Accession and Version

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