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    RIOX2 ribosomal oxygenase 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696986, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RIOX2provided by VGNC
    Official Full Name
    ribosomal oxygenase 2provided by VGNC
    Primary source
    VGNC:VGNC:76777
    Locus tag
    EGK_11218
    See related
    Ensembl:ENSMMUG00000017872
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    MINA
    Orthologs
    human mouse all
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    Genomic context

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    See RIOX2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (177966653..177997143)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (18933248..18963734, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 5H1 Neighboring gene gamma-aminobutyric acid type A receptor subunit rho3 Neighboring gene crystallin beta-gamma domain containing 3 Neighboring gene uncharacterized LOC114676454 Neighboring gene ARF like GTPase 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone H3K36 demethylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone H3K4 demethylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribosomal oxygenase 2
    Names
    MYC induced nuclear antigen
    NP_001248638.1
    XP_014984090.1
    XP_014984094.1
    XP_014984097.1
    XP_014984103.1
    XP_014984115.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261709.1 → NP_001248638.1  ribosomal oxygenase 2

      See identical proteins and their annotated locations for NP_001248638.1

      Status: PROVISIONAL

      Source sequence(s)
      JV048481
      UniProtKB/TrEMBL
      A0A8J8YET6, F6YLE8, F7DPH7, G7MJV0
      Related
      ENSMMUP00000080718.1, ENSMMUT00000082298.1
      Conserved Domains (1) summary
      pfam08007
      Location:52 → 364
      Cupin_4; Cupin superfamily protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      177966653..177997143
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015128608.2 → XP_014984094.1  ribosomal oxygenase 2 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YET6, F6YLE8, F7DPH7, G7MJV0
      Conserved Domains (1) summary
      pfam08007
      Location:52 → 364
      Cupin_4; Cupin superfamily protein

    2. XM_015128629.2 → XP_014984115.1  ribosomal oxygenase 2 isoform X2

      Conserved Domains (1) summary
      pfam08007
      Location:52 → 363
      Cupin_4; Cupin superfamily protein

    3. XM_015128604.2 → XP_014984090.1  ribosomal oxygenase 2 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YET6, F6YLE8, F7DPH7, G7MJV0
      Conserved Domains (1) summary
      pfam08007
      Location:52 → 364
      Cupin_4; Cupin superfamily protein

    4. XM_015128617.2 → XP_014984103.1  ribosomal oxygenase 2 isoform X2

      Conserved Domains (1) summary
      pfam08007
      Location:52 → 363
      Cupin_4; Cupin superfamily protein

    5. XM_015128611.2 → XP_014984097.1  ribosomal oxygenase 2 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YET6, F6YLE8, F7DPH7, G7MJV0
      Related
      ENSMMUP00000023498.2, ENSMMUT00000025118.3
      Conserved Domains (1) summary
      pfam08007
      Location:52 → 364
      Cupin_4; Cupin superfamily protein

    RNA

    1. XR_003726931.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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