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    CNOT2 CCR4-NOT transcription complex subunit 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718501, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CNOT2provided by VGNC
    Official Full Name
    CCR4-NOT transcription complex subunit 2provided by VGNC
    Primary source
    VGNC:VGNC:71387
    Locus tag
    EGK_03924
    See related
    Ensembl:ENSMMUG00000014853
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CNOT2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (69733067..69842986)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (68991317..69101075)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene myelin regulatory factor like Neighboring gene small nucleolar RNA U3 Neighboring gene potassium calcium-activated channel subfamily M regulatory beta subunit 4 Neighboring gene protein tyrosine phosphatase receptor type B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Form deprivation modulates retinal neurogenesis in primate experimental myopia. Tkatchenko AV, et al. Proc Natl Acad Sci U S A, 2006 Mar 21. PMID 16537371, Free PMC Article
    2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in nuclear-transcribed mRNA poly(A) tail shortening IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of stem cell population maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CCR4-NOT core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CCR4-NOT transcription complex subunit 2
    Names
    CCR4-associated factor 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265869.1 → NP_001252798.1  CCR4-NOT transcription complex subunit 2

      See identical proteins and their annotated locations for NP_001252798.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045437
      UniProtKB/TrEMBL
      A0A1D5Q7D4, A0A8J8XW57, F6U4L7, G7N7M8
      Related
      ENSMMUP00000043950.1, ENSMMUT00000057571.2
      Conserved Domains (1) summary
      pfam04153
      Location:396 → 519
      NOT2_3_5; NOT2 / NOT3 / NOT5 family

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      69733067..69842986
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015152183.2 → XP_015007669.1  CCR4-NOT transcription complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      F6U4L7, F7BE69
      Related
      ENSMMUP00000039183.3, ENSMMUT00000046139.3
      Conserved Domains (1) summary
      pfam04153
      Location:387 → 510
      NOT2_3_5; NOT2 / NOT3 / NOT5 family

    2. XM_015152186.2 → XP_015007672.1  CCR4-NOT transcription complex subunit 2 isoform X3

      UniProtKB/TrEMBL
      F6U4L7
      Conserved Domains (1) summary
      pfam04153
      Location:396 → 465
      NOT2_3_5; NOT2 / NOT3 / NOT5 family

    3. XM_015152184.2 → XP_015007670.1  CCR4-NOT transcription complex subunit 2 isoform X2

      UniProtKB/TrEMBL
      F6U4L7
      Related
      ENSMMUP00000019501.4, ENSMMUT00000020842.4
      Conserved Domains (1) summary
      pfam04153
      Location:376 → 499
      NOT2_3_5; NOT2 / NOT3 / NOT5 family
    Nucleotide Protein
    Heading Accession and Version

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