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    ZNF654 zinc finger protein 654 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693862, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZNF654provided by VGNC
    Official Full Name
    zinc finger protein 654provided by VGNC
    Primary source
    VGNC:VGNC:82560
    See related
    Ensembl:ENSMMUG00000043727
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF654 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (183914805..183997452, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (12812590..12895704)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette sub-family F member 2 pseudogene Neighboring gene chromobox protein homolog 5 pseudogene Neighboring gene chromosome 2 C3orf38 homolog Neighboring gene CGG triplet repeat binding protein 1 Neighboring gene 5-hydroxytryptamine receptor 1F Neighboring gene U6atac minor spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 654

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      183914805..183997452 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028844713.1 → XP_028700546.1  zinc finger protein 654 isoform X2

      Conserved Domains (3) summary
      sd00017
      Location:676 → 696
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:434 → 453
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam08580
      Location:757 → 958
      KAR9; Yeast cortical protein KAR9

    2. XM_015129182.2 → XP_014984668.2  zinc finger protein 654 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QDT0
      Related
      ENSMMUP00000046199.2, ENSMMUT00000071588.2
      Conserved Domains (3) summary
      sd00017
      Location:789 → 809
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:547 → 566
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam08580
      Location:870 → 1071
      KAR9; Yeast cortical protein KAR9

    3. XM_028844717.1 → XP_028700550.1  zinc finger protein 654 isoform X3

      Conserved Domains (3) summary
      sd00017
      Location:577 → 597
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:335 → 354
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam08580
      Location:658 → 859
      KAR9; Yeast cortical protein KAR9

    4. XM_028844714.1 → XP_028700547.1  zinc finger protein 654 isoform X3

      Conserved Domains (3) summary
      sd00017
      Location:577 → 597
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:335 → 354
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam08580
      Location:658 → 859
      KAR9; Yeast cortical protein KAR9

    5. XM_028844716.1 → XP_028700549.1  zinc finger protein 654 isoform X3

      Conserved Domains (3) summary
      sd00017
      Location:577 → 597
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:335 → 354
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam08580
      Location:658 → 859
      KAR9; Yeast cortical protein KAR9

    6. XM_028844715.1 → XP_028700548.1  zinc finger protein 654 isoform X3

      Conserved Domains (3) summary
      sd00017
      Location:577 → 597
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:335 → 354
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam08580
      Location:658 → 859
      KAR9; Yeast cortical protein KAR9

    7. XM_028844718.1 → XP_028700551.1  zinc finger protein 654 isoform X4

      Conserved Domains (3) summary
      sd00017
      Location:515 → 535
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:273 → 292
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam08580
      Location:596 → 797
      KAR9; Yeast cortical protein KAR9
    Nucleotide Protein
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