U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    DAG1 dystroglycan 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706179, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    DAG1provided by VGNC
    Official Full Name
    dystroglycan 1provided by VGNC
    Primary source
    VGNC:VGNC:71728
    See related
    Ensembl:ENSMMUG00000004683
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See DAG1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (105573252..105650465)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (92801056..92877707, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene T cell leukemia translocation altered Neighboring gene nicolin 1, tubulin polyglutamylase complex subunit Neighboring gene aminomethyltransferase Neighboring gene bassoon presynaptic cytomatrix protein Neighboring gene acylaminoacyl-peptide hydrolase

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables laminin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in morphogenesis of an epithelium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in muscle attachment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nerve development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in basement membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of dystroglycan complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of dystrophin-associated glycoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    dystroglycan 1; dystroglycan
    Names
    dystroglycan 1 (dystrophin-associated glycoprotein 1)
    dystroglycan preproprotein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261351.1 → NP_001248280.1  dystroglycan 1 precursor

      See identical proteins and their annotated locations for NP_001248280.1

      Status: PROVISIONAL

      Source sequence(s)
      JU474483
      UniProtKB/TrEMBL
      F6RU72, I0FPJ6
      Related
      ENSMMUP00000006224.2, ENSMMUT00000006615.4
      Conserved Domains (4) summary
      cd11303
      Location:61 → 162
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:181 → 303
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      PRK14971
      Location:302 → 403
      PRK14971; DNA polymerase III subunits gamma and tau; Provisional
      pfam05454
      Location:605 → 894
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      105573252..105650465
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028843247.1 → XP_028699080.1  dystroglycan isoform X2

      UniProtKB/TrEMBL
      F6RU72, I0FPJ6
      Conserved Domains (4) summary
      cd11303
      Location:61 → 162
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:181 → 303
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      PRK14971
      Location:302 → 403
      PRK14971; DNA polymerase III subunits gamma and tau; Provisional
      pfam05454
      Location:605 → 894
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    2. XM_028843245.1 → XP_028699078.1  dystroglycan isoform X1

      UniProtKB/TrEMBL
      I0FPJ6
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    3. XM_015130806.2 → XP_014986292.1  dystroglycan isoform X1

      UniProtKB/TrEMBL
      I0FPJ6
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    4. XM_015130798.2 → XP_014986284.1  dystroglycan isoform X1

      UniProtKB/TrEMBL
      I0FPJ6
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    5. XM_015130811.2 → XP_014986297.1  dystroglycan isoform X2

      UniProtKB/TrEMBL
      F6RU72, I0FPJ6
      Conserved Domains (4) summary
      cd11303
      Location:61 → 162
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:181 → 303
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      PRK14971
      Location:302 → 403
      PRK14971; DNA polymerase III subunits gamma and tau; Provisional
      pfam05454
      Location:605 → 894
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    6. XM_015130810.2 → XP_014986296.1  dystroglycan isoform X2

      UniProtKB/TrEMBL
      F6RU72, I0FPJ6
      Conserved Domains (4) summary
      cd11303
      Location:61 → 162
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:181 → 303
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      PRK14971
      Location:302 → 403
      PRK14971; DNA polymerase III subunits gamma and tau; Provisional
      pfam05454
      Location:605 → 894
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    7. XM_015130809.2 → XP_014986295.1  dystroglycan isoform X2

      UniProtKB/TrEMBL
      F6RU72, I0FPJ6
      Conserved Domains (4) summary
      cd11303
      Location:61 → 162
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:181 → 303
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      PRK14971
      Location:302 → 403
      PRK14971; DNA polymerase III subunits gamma and tau; Provisional
      pfam05454
      Location:605 → 894
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    8. XM_015130799.2 → XP_014986285.1  dystroglycan isoform X1

      UniProtKB/TrEMBL
      I0FPJ6
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    9. XM_015130807.2 → XP_014986293.1  dystroglycan isoform X2

      UniProtKB/TrEMBL
      F6RU72, I0FPJ6
      Related
      ENSMMUP00000067608.1, ENSMMUT00000088008.1
      Conserved Domains (4) summary
      cd11303
      Location:61 → 162
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      cd11305
      Location:181 → 303
      alpha_DG_C; C-terminal domain of alpha dystroglycan
      PRK14971
      Location:302 → 403
      PRK14971; DNA polymerase III subunits gamma and tau; Provisional
      pfam05454
      Location:605 → 894
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)

    10. XM_015130804.2 → XP_014986290.1  dystroglycan isoform X1

      UniProtKB/TrEMBL
      I0FPJ6
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    11. XM_015130800.2 → XP_014986286.1  dystroglycan isoform X1

      UniProtKB/TrEMBL
      I0FPJ6
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    12. XM_015130801.2 → XP_014986287.1  dystroglycan isoform X1

      UniProtKB/TrEMBL
      I0FPJ6
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2

    13. XM_015130803.2 → XP_014986289.1  dystroglycan isoform X1

      UniProtKB/TrEMBL
      I0FPJ6
      Conserved Domains (4) summary
      cd11303
      Location:61 → 168
      Dystroglycan_repeat; Cadherin-like repeat domain of alpha dystroglycan
      PRK14971
      Location:308 → 409
      PRK14971; DNA polymerase III subunit gamma/tau
      pfam05454
      Location:611 → 900
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
      pfam18424
      Location:187 → 309
      a_DG1_N2; Alpha-Dystroglycan N-terminal domain 2
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.