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    APBA3 amyloid beta precursor protein binding family A member 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713752, updated on 17-Aug-2024

    Summary

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    Official Symbol
    APBA3provided by VGNC
    Official Full Name
    amyloid beta precursor protein binding family A member 3provided by VGNC
    Primary source
    VGNC:VGNC:69978
    See related
    Ensembl:ENSMMUG00000009672
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See APBA3 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (3642274..3653237, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (3777694..3789003, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L26 pseudogene Neighboring gene tight junction protein 3 Neighboring gene mitochondrial ribosomal protein L54 Neighboring gene retina and anterior neural fold homeobox 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables amyloid-beta binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dendritic spine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    amyloid beta A4 precursor protein-binding family A member 3; amyloid-beta A4 precursor protein-binding family A member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      3642274..3653237 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015122473.2 → XP_014977959.2  amyloid-beta A4 precursor protein-binding family A member 3

      UniProtKB/TrEMBL
      F6YCI6, G7NLV2, H9Z2E0
      Related
      ENSMMUP00000012655.3, ENSMMUT00000013507.4
      Conserved Domains (4) summary
      cd00992
      Location:483 → 556
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:212 → 364
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:394 → 477
      PDZ; PDZ domain (Also known as DHR or GLGF)
      cl29137
      Location:83 → 198
      Trypan_PARP; Procyclic acidic repetitive protein (PARP)

    2. XM_001100759.4 → XP_001100759.2  amyloid-beta A4 precursor protein-binding family A member 3

      UniProtKB/TrEMBL
      F6YCI6, G7NLV2, H9Z2E0
      Conserved Domains (4) summary
      cd00992
      Location:483 → 556
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:212 → 364
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:394 → 477
      PDZ; PDZ domain (Also known as DHR or GLGF)
      cl29137
      Location:83 → 198
      Trypan_PARP; Procyclic acidic repetitive protein (PARP)
    Nucleotide Protein
    Heading Accession and Version

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