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    TSPAN16 tetraspanin 16 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714278, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TSPAN16provided by VGNC
    Official Full Name
    tetraspanin 16provided by VGNC
    Primary source
    VGNC:VGNC:79870
    See related
    Ensembl:ENSMMUG00000011311
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See TSPAN16 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (11058232..11075024)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (11333088..11350222)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene KN motif and ankyrin repeat domains 2 Neighboring gene dedicator of cytokinesis 6 Neighboring gene angiopoietin like 8 Neighboring gene RAB3D, member RAS oncogene family Neighboring gene transmembrane protein 205

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetraspanin-16

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      11058232..11075024
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015122933.2 → XP_014978419.2  tetraspanin-16 isoform X4

      Conserved Domains (2) summary
      pfam00335
      Location:19 → 203
      Tetraspannin; Tetraspanin family
      cl02781
      Location:115 → 179
      tetraspanin_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL). Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the ...

    2. XM_028838721.1 → XP_028694554.1  tetraspanin-16 isoform X3

      UniProtKB/TrEMBL
      G7NL22
      Conserved Domains (2) summary
      cd03156
      Location:95 → 190
      uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
      pfam00335
      Location:19 → 214
      Tetraspannin; Tetraspanin family

    3. XM_001104277.4 → XP_001104277.3  tetraspanin-16 isoform X1

      UniProtKB/TrEMBL
      G7NL22
      Conserved Domains (2) summary
      cd03156
      Location:120 → 215
      uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
      pfam00335
      Location:19 → 239
      Tetraspannin; Tetraspanin family

    4. XM_015122932.2 → XP_014978418.2  tetraspanin-16 isoform X2

      UniProtKB/TrEMBL
      F6UGR0
      Related
      ENSMMUP00000014835.3, ENSMMUT00000015834.4
      Conserved Domains (2) summary
      cd03156
      Location:97 → 192
      uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
      pfam00335
      Location:18 → 216
      Tetraspannin; Tetraspanin family
    Nucleotide Protein
    Heading Accession and Version

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