SNX27 sorting nexin 27 [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: SNX27provided by VGNC
Official Full Name: sorting nexin 27provided by VGNC
Primary source: VGNC:VGNC:77742
See related: Ensembl:ENSMMUG00000016920
Gene type: protein coding
RefSeq status: MODEL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	1	NC_041754.1 (99400472..99489277, complement)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	1	NC_027893.1 (126124583..126211108)

Chromosome 1 - NC_041754.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

RH125229 (e-PCR)
- UniSTS:162051

REN34885 (e-PCR)
- UniSTS:359685

REN34887 (e-PCR)
- UniSTS:359687

ECD19292 (e-PCR)
- UniSTS:300299

ECD17755 (e-PCR)
- UniSTS:298767

REN34898 (e-PCR)
- UniSTS:359698

REN34903 (e-PCR)
- UniSTS:359703

REN34906 (e-PCR)
- UniSTS:359706

REN34907 (e-PCR)
- UniSTS:359707

REN34911 (e-PCR)
- UniSTS:359711

REN34912 (e-PCR)
- UniSTS:359712

REN34915 (e-PCR)
- UniSTS:359715

REN34916 (e-PCR)
- UniSTS:359716

REN34917 (e-PCR)
- UniSTS:359717

ECD18290 (e-PCR)
- UniSTS:299301

REN34923 (e-PCR)
- UniSTS:359723

REN34924 (e-PCR)
- UniSTS:359724

REN34925 (e-PCR)
- UniSTS:359725

REN34926 (e-PCR)
- UniSTS:359726

REN34927 (e-PCR)
- UniSTS:359727

REN34928 (e-PCR)
- UniSTS:359728

REN34933 (e-PCR)
- UniSTS:359733

REN34934 (e-PCR)
- UniSTS:359734

REN34937 (e-PCR)
- UniSTS:359737

REN34938 (e-PCR)
- UniSTS:359738

REN34939 (e-PCR)
- UniSTS:359739

REN34940 (e-PCR)
- UniSTS:359740

REN34941 (e-PCR)
- UniSTS:359741

REN34943 (e-PCR)
- UniSTS:359743

REN34944 (e-PCR)
- UniSTS:359744

REN34945 (e-PCR)
- UniSTS:359745

REN34946 (e-PCR)
- UniSTS:359746

REN34949 (e-PCR)
- UniSTS:359749

REN34950 (e-PCR)
- UniSTS:359750

REN34960 (e-PCR)
- UniSTS:359760

ECD08825 (e-PCR)
- UniSTS:289873

REN34961 (e-PCR)
- UniSTS:359761

ECD15003 (e-PCR)
- UniSTS:296020

REN34965 (e-PCR)
- UniSTS:359765

REN34974 (e-PCR)
- UniSTS:359774

ECD16812 (e-PCR)
- UniSTS:297827

REN34995 (e-PCR)
- UniSTS:359795

ECD18881 (e-PCR)
- UniSTS:299891

REN34996 (e-PCR)
- UniSTS:359796

ECD03971 (e-PCR)
- UniSTS:285051

ECD09902 (e-PCR)
- UniSTS:290943

REN35009 (e-PCR)
- UniSTS:359809

REN35011 (e-PCR)
- UniSTS:359811

REN35012 (e-PCR)
- UniSTS:359812

REN35013 (e-PCR)
- UniSTS:359813

MARC_7153-7154:992008256:1 (e-PCR)
- UniSTS:231304

MARC_7153-7154:996687560:1 (e-PCR)
- UniSTS:231304

REN35023 (e-PCR)
- UniSTS:359823

ECD01154 (e-PCR)
- UniSTS:282261

REN35030 (e-PCR)
- UniSTS:359830

REN35031 (e-PCR)
- UniSTS:359831

REN35034 (e-PCR)
- UniSTS:359834

SHGC-5606 (e-PCR)
- UniSTS:18843

REN35035 (e-PCR)
- UniSTS:359835

REN35037 (e-PCR)
- UniSTS:359837

REN35038 (e-PCR)
- UniSTS:359838

REN35040 (e-PCR)
- UniSTS:359840

REN35041 (e-PCR)
- UniSTS:359841

REN35042 (e-PCR)
- UniSTS:359842

REN35044 (e-PCR)
- UniSTS:359844

REN35045 (e-PCR)
- UniSTS:359845

REN35047 (e-PCR)
- UniSTS:359847

ECD12255 (e-PCR)
- UniSTS:293288

REN35048 (e-PCR)
- UniSTS:359848

REN35049 (e-PCR)
- UniSTS:359849

REN35050 (e-PCR)
- UniSTS:359850

REN35051 (e-PCR)
- UniSTS:359851

REN35052 (e-PCR)
- UniSTS:359852

stSG627328 (e-PCR)
- UniSTS:457388

stSG627329 (e-PCR)
- UniSTS:457389

stSG627330 (e-PCR)
- UniSTS:457390

REN35055 (e-PCR)
- UniSTS:359855

stSG627332 (e-PCR)
- UniSTS:457391

REN35056 (e-PCR)
- UniSTS:359856

REN35060 (e-PCR)
- UniSTS:359860

stSG627338 (e-PCR)
- UniSTS:457397

REN35062 (e-PCR)
- UniSTS:359862

ECD17922 (e-PCR)
- UniSTS:298934

ECD23583 (e-PCR)
- UniSTS:304567

stSG627342 (e-PCR)
- UniSTS:457401

ECD13557 (e-PCR)
- UniSTS:294586

stSG627343 (e-PCR)
- UniSTS:457402

REN35069 (e-PCR)
- UniSTS:359869

stSG627346 (e-PCR)
- UniSTS:457405

stSG627347 (e-PCR)
- UniSTS:457406

stSG627348 (e-PCR)
- UniSTS:457407

REN35072 (e-PCR)
- UniSTS:359872

ECD22823 (e-PCR)
- UniSTS:303808

REN35073 (e-PCR)
- UniSTS:359873

stSG627355 (e-PCR)
- UniSTS:457411

stSG627356 (e-PCR)
- UniSTS:457412

stSG627357 (e-PCR)
- UniSTS:457413

stSG627359 (e-PCR)
- UniSTS:457414

stSG627360 (e-PCR)
- UniSTS:457415

stSG627361 (e-PCR)
- UniSTS:457416

stSG627362 (e-PCR)
- UniSTS:457417

REN35083 (e-PCR)
- UniSTS:359883

stSG627364 (e-PCR)
- UniSTS:457419

REN34828 (e-PCR)
- UniSTS:359628

REN35085 (e-PCR)
- UniSTS:359885

REN34830 (e-PCR)
- UniSTS:359630

stSG627367 (e-PCR)
- UniSTS:457422

REN34831 (e-PCR)
- UniSTS:359631

REN34832 (e-PCR)
- UniSTS:359632

REN35088 (e-PCR)
- UniSTS:359888

REN34834 (e-PCR)
- UniSTS:359634

REN34835 (e-PCR)
- UniSTS:359635

REN34836 (e-PCR)
- UniSTS:359636

REN34837 (e-PCR)
- UniSTS:359637

ECD01220 (e-PCR)
- UniSTS:282327

REN35096 (e-PCR)
- UniSTS:359896

REN35097 (e-PCR)
- UniSTS:359897

REN35098 (e-PCR)
- UniSTS:359898

REN35099 (e-PCR)
- UniSTS:359899

REN34844 (e-PCR)
- UniSTS:359644

REN35100 (e-PCR)
- UniSTS:359900

REN34845 (e-PCR)
- UniSTS:359645

REN35102 (e-PCR)
- UniSTS:359902

REN35103 (e-PCR)
- UniSTS:359903

REN35104 (e-PCR)
- UniSTS:359904

REN34850 (e-PCR)
- UniSTS:359650

REN34851 (e-PCR)
- UniSTS:359651

REN34853 (e-PCR)
- UniSTS:359653

REN35109 (e-PCR)
- UniSTS:359909

REN34854 (e-PCR)
- UniSTS:359654

REN34855 (e-PCR)
- UniSTS:359655

REN35111 (e-PCR)
- UniSTS:359911

REN35113 (e-PCR)
- UniSTS:359913

ECD20287 (e-PCR)
- UniSTS:301290

REN35115 (e-PCR)
- UniSTS:359915

REN35116 (e-PCR)
- UniSTS:359916

REN35117 (e-PCR)
- UniSTS:359917

REN34865 (e-PCR)
- UniSTS:359665

REN34867 (e-PCR)
- UniSTS:359667

REN34868 (e-PCR)
- UniSTS:359668

REN34869 (e-PCR)
- UniSTS:359669

REN35126 (e-PCR)
- UniSTS:359926

REN34871 (e-PCR)
- UniSTS:359671

REN34878 (e-PCR)
- UniSTS:359678

REN34879 (e-PCR)
- UniSTS:359679

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables phosphatidylinositol-3-phosphate binding	IEA Inferred from Electronic Annotation more info	PubMed
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in intracellular protein transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in signal transduction	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in early endosome	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: sorting nexin-27

Names: sorting nexin family member 27

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

NC_041754.1 Reference Mmul_10 Primary Assembly

Range

99400472..99489277 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015152169.2 → XP_015007655.1 sorting nexin-27 isoform X1

UniProtKB/TrEMBL

F7CIG2

Related

ENSMMUP00000022252.4, ENSMMUT00000023775.4

Conserved Domains (4) summary

cd06886
Location:160 → 265

PX_SNX27; The phosphoinositide binding Phox Homology domain of Sorting Nexin 27

cd00992
Location:41 → 133

PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

cd13338
Location:425 → 526

FERM-like_C_SNX27; Atypical FERM-like domain C-lobe of Sorting nexin 27

cd01777
Location:273 → 365

FERM_F1_SNX27; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in sorting nexin protein 27 (SNX27)
XM_015152175.2 → XP_015007661.1 sorting nexin-27 isoform X2

UniProtKB/TrEMBL

F7CIG2, F7CIX5

Related

ENSMMUP00000022248.4, ENSMMUT00000023771.4

Conserved Domains (4) summary

cd06886
Location:160 → 265

PX_SNX27; The phosphoinositide binding Phox Homology domain of Sorting Nexin 27

cd00992
Location:41 → 133

PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

cd13338
Location:425 → 526

FERM-like_C_SNX27; Atypical FERM-like domain C-lobe of Sorting nexin 27

cd01777
Location:273 → 365

FERM_F1_SNX27; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in sorting nexin protein 27 (SNX27)
XM_015152182.2 → XP_015007668.1 sorting nexin-27 isoform X3

UniProtKB/TrEMBL

G7MDL0

Conserved Domains (4) summary

cd06886
Location:57 → 162

PX_SNX27; The phosphoinositide binding Phox Homology domain of Sorting Nexin 27

cd13338
Location:322 → 423

FERM-like_C_SNX27; Atypical FERM-like domain C-lobe of Sorting nexin 27

cd01777
Location:170 → 262

FERM_F1_SNX27; FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in sorting nexin protein 27 (SNX27)

cl00117
Location:2 → 30

PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...