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    CACFD1 calcium channel flower domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713680, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CACFD1provided by VGNC
    Official Full Name
    calcium channel flower domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:70485
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CACFD1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (4782449..4793245, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (4891123..4903171, complement)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene myomaker, myoblast fusion factor Neighboring gene solute carrier family 2 member 6 Neighboring gene uncharacterized LOC114672700 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 13 Neighboring gene REX4 homolog, 3'-5' exonuclease

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calcium channel flower homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      4782449..4793245 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001100830.4 → XP_001100830.1  calcium channel flower homolog isoform X2

      See identical proteins and their annotated locations for XP_001100830.1

      UniProtKB/TrEMBL
      G7NFA0
      Conserved Domains (1) summary
      smart01077
      Location:35 → 143
      Cg6151-P; Uncharacterized conserved protein CG6151-P

    2. XM_015116446.2 → XP_014971932.1  calcium channel flower homolog isoform X1

      Conserved Domains (1) summary
      smart01077
      Location:199 → 300
      Cg6151-P; Uncharacterized conserved protein CG6151-P
    Nucleotide Protein
    Heading Accession and Version

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