U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RBFOX1 RNA binding fox-1 homolog 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713147, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RBFOX1provided by VGNC
    Official Full Name
    RNA binding fox-1 homolog 1provided by VGNC
    Primary source
    VGNC:VGNC:76507
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    A2BP1
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RBFOX1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (5320850..7802213)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (5620305..7784292)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114674369 Neighboring gene uncharacterized LOC114674368 Neighboring gene nucleophosmin pseudogene Neighboring gene 40S ribosomal protein S3a pseudogene Neighboring gene U1 small nuclear ribonucleoprotein C pseudogene Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene 40S ribosomal protein S26-like Neighboring gene uncharacterized LOC114674371 Neighboring gene small nucleolar RNA SNORA40 Neighboring gene uncharacterized LOC106994938

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    LOW QUALITY PROTEIN: RNA binding protein fox-1 homolog 1
    Names
    RNA binding protein, fox-1 homolog 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      5320850..7802213
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028840931.1 → XP_028696764.1  LOW QUALITY PROTEIN: RNA binding protein fox-1 homolog 1

      Conserved Domains (4) summary
      PRK03427
      Location:269 → 401
      PRK03427; cell division protein ZipA; Provisional
      PRK12678
      Location:27 → 194
      PRK12678; transcription termination factor Rho; Provisional
      cd12407
      Location:396 → 471
      RRM_FOX1_like; RNA recognition motif in vertebrate RNA binding protein fox-1 homologs and similar proteins
      pfam12414
      Location:532 → 620
      Fox-1_C; Calcitonin gene-related peptide regulator C terminal
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.