U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TFDP2 transcription factor Dp-2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714655, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TFDP2provided by VGNC
    Official Full Name
    transcription factor Dp-2provided by VGNC
    Primary source
    VGNC:VGNC:78324
    See related
    Ensembl:ENSMMUG00000011134
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TFDP2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (44070437..44273083, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (159723051..159925815)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676261 Neighboring gene U6 spliceosomal RNA Neighboring gene ATPase Na+/K+ transporting subunit beta 3 Neighboring gene 60S ribosomal protein L19 pseudogene Neighboring gene small nuclear ribonucleoprotein G pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC114676262 Neighboring gene glycerol kinase 5 Neighboring gene bone morphogenetic protein receptor type-1A pseudogene

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transcription factor Dp-2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261774.1 → NP_001248703.1  transcription factor Dp-2

      See identical proteins and their annotated locations for NP_001248703.1

      Status: PROVISIONAL

      Source sequence(s)
      JU472188
      UniProtKB/TrEMBL
      F6TQY9, G7MJL5
      Related
      ENSMMUP00000014573.3, ENSMMUT00000015560.4
      Conserved Domains (3) summary
      cd14458
      Location:213 → 259
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:129 → 208
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:215 → 353
      DP; Transcription factor DP

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      44070437..44273083 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028843370.1 → XP_028699203.1  transcription factor Dp-2 isoform X7

      UniProtKB/TrEMBL
      G7MJL5
      Conserved Domains (3) summary
      cd14458
      Location:152 → 198
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:68 → 147
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:154 → 292
      DP; Transcription factor DP

    2. XM_028843368.1 → XP_028699201.1  transcription factor Dp-2 isoform X7

      UniProtKB/TrEMBL
      G7MJL5
      Conserved Domains (3) summary
      cd14458
      Location:152 → 198
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:68 → 147
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:154 → 292
      DP; Transcription factor DP

    3. XM_028843366.1 → XP_028699199.1  transcription factor Dp-2 isoform X2

      UniProtKB/TrEMBL
      F6TQY9, G7MJL5
      Conserved Domains (3) summary
      cd14458
      Location:213 → 259
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:129 → 208
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:215 → 353
      DP; Transcription factor DP

    4. XM_015131931.2 → XP_014987417.1  transcription factor Dp-2 isoform X4

      UniProtKB/TrEMBL
      G7MJL5
      Conserved Domains (3) summary
      cd14458
      Location:196 → 242
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:112 → 191
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:198 → 336
      DP; Transcription factor DP

    5. XM_015131935.2 → XP_014987421.1  transcription factor Dp-2 isoform X7

      UniProtKB/TrEMBL
      G7MJL5
      Conserved Domains (3) summary
      cd14458
      Location:152 → 198
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:68 → 147
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:154 → 292
      DP; Transcription factor DP

    6. XM_015131939.2 → XP_014987425.1  transcription factor Dp-2 isoform X9

      UniProtKB/TrEMBL
      A0A1D5QK34, A0A1D5QWZ7
      Conserved Domains (3) summary
      cd14458
      Location:116 → 162
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:32 → 111
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:118 → 256
      DP; Transcription factor DP

    7. XM_015131942.2 → XP_014987428.1  transcription factor Dp-2 isoform X11

      UniProtKB/TrEMBL
      G7MJL5
      Conserved Domains (3) summary
      cd14458
      Location:185 → 231
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:101 → 180
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:187 → 325
      DP; Transcription factor DP

    8. XM_015131940.2 → XP_014987426.1  transcription factor Dp-2 isoform X10

      UniProtKB/TrEMBL
      A0A1D5QWZ7
      Related
      ENSMMUP00000052577.2, ENSMMUT00000067881.2
      Conserved Domains (3) summary
      cd14458
      Location:100 → 146
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:16 → 95
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:102 → 240
      DP; Transcription factor DP

    9. XM_015131938.2 → XP_014987424.1  transcription factor Dp-2 isoform X9

      UniProtKB/TrEMBL
      A0A1D5QK34, A0A1D5QWZ7
      Related
      ENSMMUP00000048407.2, ENSMMUT00000063894.2
      Conserved Domains (3) summary
      cd14458
      Location:116 → 162
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:32 → 111
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:118 → 256
      DP; Transcription factor DP

    10. XM_015131932.2 → XP_014987418.1  transcription factor Dp-2 isoform X6

      UniProtKB/TrEMBL
      G7MJL5
      Conserved Domains (3) summary
      cd14458
      Location:153 → 199
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:68 → 148
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:155 → 293
      DP; Transcription factor DP

    11. XM_015131941.2 → XP_014987427.1  transcription factor Dp-2 isoform X10

      UniProtKB/TrEMBL
      A0A1D5QWZ7
      Conserved Domains (3) summary
      cd14458
      Location:100 → 146
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:16 → 95
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:102 → 240
      DP; Transcription factor DP

    12. XM_015131933.2 → XP_014987419.1  transcription factor Dp-2 isoform X6

      UniProtKB/TrEMBL
      G7MJL5
      Conserved Domains (3) summary
      cd14458
      Location:153 → 199
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:68 → 148
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:155 → 293
      DP; Transcription factor DP

    13. XM_015131927.2 → XP_014987413.1  transcription factor Dp-2 isoform X1

      UniProtKB/TrEMBL
      F6TKB7, G7MJL5
      Conserved Domains (3) summary
      cd14458
      Location:214 → 260
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:129 → 209
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:216 → 354
      DP; Transcription factor DP

    14. XM_015131934.2 → XP_014987420.1  transcription factor Dp-2 isoform X6

      UniProtKB/TrEMBL
      G7MJL5
      Conserved Domains (3) summary
      cd14458
      Location:153 → 199
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:68 → 148
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:155 → 293
      DP; Transcription factor DP

    15. XM_028843367.1 → XP_028699200.1  transcription factor Dp-2 isoform X5

      UniProtKB/TrEMBL
      G7MJL5
      Conserved Domains (2) summary
      pfam02319
      Location:129 → 209
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:216 → 331
      DP; Transcription factor DP

    16. XM_028843369.1 → XP_028699202.1  transcription factor Dp-2 isoform X8

      UniProtKB/TrEMBL
      G7MJL5
      Conserved Domains (3) summary
      cd14458
      Location:127 → 173
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:41 → 122
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:129 → 267
      DP; Transcription factor DP

    17. XM_015131929.2 → XP_014987415.1  transcription factor Dp-2 isoform X1

      UniProtKB/TrEMBL
      F6TKB7, G7MJL5
      Related
      ENSMMUP00000014575.4, ENSMMUT00000015562.4
      Conserved Domains (3) summary
      cd14458
      Location:214 → 260
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:129 → 209
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:216 → 354
      DP; Transcription factor DP

    18. XM_015131930.2 → XP_014987416.1  transcription factor Dp-2 isoform X3

      UniProtKB/TrEMBL
      G7MJL5
      Conserved Domains (3) summary
      cd14458
      Location:197 → 243
      DP_DD; coiled coil [structural motif]
      pfam02319
      Location:112 → 192
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
      pfam08781
      Location:199 → 338
      DP; Transcription factor DP
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.