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    NR5A1 nuclear receptor subfamily 5 group A member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694183, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NR5A1provided by VGNC
    Official Full Name
    nuclear receptor subfamily 5 group A member 1provided by VGNC
    Primary source
    VGNC:VGNC:75520
    See related
    Ensembl:ENSMMUG00000014111
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See NR5A1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (16173168..16199515)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (14542429..14569143)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 6 group A member 1 Neighboring gene ran-specific GTPase-activating protein-like Neighboring gene uncharacterized LOC106993609 Neighboring gene adhesion G protein-coupled receptor D2 Neighboring gene proteasome 20S subunit beta 7 Neighboring gene NIMA related kinase 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hormone-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tissue development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase II transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    steroidogenic factor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      16173168..16199515
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001082881.4 → XP_001082881.3  steroidogenic factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RAF2, A0A5K1UJF0
      Related
      ENSMMUP00000057293.2, ENSMMUT00000078575.2
      Conserved Domains (3) summary
      cd07070
      Location:223 → 459
      NR_LBD_SF-1; The ligand binding domain of nuclear receptor steroidogenic factor 1, a member of nuclear receptor superfamily
      cd07167
      Location:13 → 105
      NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
      PHA03247
      Location:137 → 216
      PHA03247; large tegument protein UL36; Provisional

    2. XM_028834870.1 → XP_028690703.1  steroidogenic factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RAF2, A0A5K1UJF0
      Conserved Domains (3) summary
      cd07070
      Location:223 → 459
      NR_LBD_SF-1; The ligand binding domain of nuclear receptor steroidogenic factor 1, a member of nuclear receptor superfamily
      cd07167
      Location:13 → 105
      NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
      PHA03247
      Location:137 → 216
      PHA03247; large tegument protein UL36; Provisional

    3. XM_015116867.2 → XP_014972353.2  steroidogenic factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RAF2, A0A5K1UJF0
      Conserved Domains (3) summary
      cd07070
      Location:223 → 459
      NR_LBD_SF-1; The ligand binding domain of nuclear receptor steroidogenic factor 1, a member of nuclear receptor superfamily
      cd07167
      Location:13 → 105
      NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
      PHA03247
      Location:137 → 216
      PHA03247; large tegument protein UL36; Provisional

    4. XM_028834871.1 → XP_028690704.1  steroidogenic factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RAF2, A0A5K1UJF0
      Related
      ENSMMUP00000018545.4, ENSMMUT00000019810.4
      Conserved Domains (3) summary
      cd07070
      Location:223 → 459
      NR_LBD_SF-1; The ligand binding domain of nuclear receptor steroidogenic factor 1, a member of nuclear receptor superfamily
      cd07167
      Location:13 → 105
      NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
      PHA03247
      Location:137 → 216
      PHA03247; large tegument protein UL36; Provisional

    5. XM_015116869.2 → XP_014972355.2  steroidogenic factor 1 isoform X2

      UniProtKB/TrEMBL
      G7NER8
      Conserved Domains (3) summary
      cd07070
      Location:136 → 372
      NR_LBD_SF-1; The ligand binding domain of nuclear receptor steroidogenic factor 1, a member of nuclear receptor superfamily
      pfam15822
      Location:53 → 134
      MISS; MAPK-interacting and spindle-stabilizing protein-like
      cl02596
      Location:1 → 18
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
    Nucleotide Protein
    Heading Accession and Version

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