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    CHST1 carbohydrate sulfotransferase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715176, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CHST1provided by VGNC
    Official Full Name
    carbohydrate sulfotransferase 1provided by VGNC
    Primary source
    VGNC:VGNC:71055
    See related
    Ensembl:ENSMMUG00000000874
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CHST1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (20102495..20119788)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (20385280..20402343)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106993241 Neighboring gene uncharacterized LOC114672268 Neighboring gene uncharacterized LOC106993242 Neighboring gene uncharacterized LOC106993243 Neighboring gene putative uncharacterized protein FLJ41423

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables keratan sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in N-acetylglucosamine metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in keratan sulfate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    carbohydrate sulfotransferase 1
    NP_001252840.1
    XP_014969723.1
    XP_014969724.1
    XP_014969725.1
    XP_028688599.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265911.1 → NP_001252840.1  carbohydrate sulfotransferase 1 precursor

      See identical proteins and their annotated locations for NP_001252840.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320857
      UniProtKB/TrEMBL
      F6TF94, G7NDI2
      Conserved Domains (1) summary
      pfam00685
      Location:200 → 384
      Sulfotransfer_1; Sulfotransferase domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      20102495..20119788
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015114238.2 → XP_014969724.1  carbohydrate sulfotransferase 1 isoform X1

      UniProtKB/TrEMBL
      F6TF94, G7NDI2
      Related
      ENSMMUP00000001168.1, ENSMMUT00000001246.3
      Conserved Domains (1) summary
      pfam00685
      Location:200 → 384
      Sulfotransfer_1; Sulfotransferase domain

    2. XM_015114239.2 → XP_014969725.1  carbohydrate sulfotransferase 1 isoform X1

      UniProtKB/TrEMBL
      F6TF94, G7NDI2
      Conserved Domains (1) summary
      pfam00685
      Location:200 → 384
      Sulfotransfer_1; Sulfotransferase domain

    3. XM_015114237.2 → XP_014969723.1  carbohydrate sulfotransferase 1 isoform X1

      UniProtKB/TrEMBL
      F6TF94, G7NDI2
      Conserved Domains (1) summary
      pfam00685
      Location:200 → 384
      Sulfotransfer_1; Sulfotransferase domain

    4. XM_028832766.1 → XP_028688599.1  carbohydrate sulfotransferase 1 isoform X1

      UniProtKB/TrEMBL
      F6TF94, G7NDI2
      Conserved Domains (1) summary
      pfam00685
      Location:200 → 384
      Sulfotransfer_1; Sulfotransferase domain
    Nucleotide Protein
    Heading Accession and Version

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