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    MSR1 macrophage scavenger receptor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709365, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MSR1provided by VGNC
    Official Full Name
    macrophage scavenger receptor 1provided by VGNC
    Primary source
    VGNC:VGNC:74939
    See related
    Ensembl:ENSMMUG00000002296
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See MSR1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (16210529..16296185, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (15775672..15861038, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L32 pseudogene Neighboring gene uncharacterized LOC114680189 Neighboring gene cytochrome c oxidase subunit 7C, mitochondrial-like Neighboring gene uncharacterized LOC114680190

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables scavenger receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in receptor-mediated endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    macrophage scavenger receptor types I and II

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      16210529..16296185 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015144805.2 → XP_015000291.2  macrophage scavenger receptor types I and II isoform X1

      UniProtKB/TrEMBL
      F6Q3T3, G7N0J7
      Related
      ENSMMUP00000032218.3, ENSMMUT00000039133.3
      Conserved Domains (4) summary
      pfam01391
      Location:280 → 334
      Collagen; Collagen triple helix repeat (20 copies)
      smart00202
      Location:350 → 450
      SR; Scavenger receptor Cys-rich
      TIGR02168
      Location:116 → 249
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam03523
      Location:121 → 169
      Macscav_rec; Macrophage scavenger receptor

    2. XM_015144806.2 → XP_015000292.2  macrophage scavenger receptor types I and II isoform X2

      UniProtKB/TrEMBL
      G7N0J7
      Conserved Domains (4) summary
      pfam01391
      Location:242 → 296
      Collagen; Collagen triple helix repeat (20 copies)
      smart00202
      Location:312 → 412
      SR; Scavenger receptor Cys-rich
      TIGR02168
      Location:78 → 211
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam03523
      Location:83 → 131
      Macscav_rec; Macrophage scavenger receptor

    3. XM_015144807.2 → XP_015000293.2  macrophage scavenger receptor types I and II isoform X3

      Conserved Domains (3) summary
      pfam01391
      Location:280 → 334
      Collagen; Collagen triple helix repeat (20 copies)
      TIGR02168
      Location:116 → 249
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam03523
      Location:121 → 169
      Macscav_rec; Macrophage scavenger receptor
    Nucleotide Protein
    Heading Accession and Version

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