U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CATSPERE catsper channel auxiliary subunit epsilon [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704627, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CATSPEREprovided by VGNC
    Official Full Name
    catsper channel auxiliary subunit epsilonprovided by VGNC
    Primary source
    VGNC:VGNC:70657
    See related
    Ensembl:ENSMMUG00000000021
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C1H1orf101
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CATSPERE in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (4478243..4663260, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (220944044..221128853)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S2 pseudogene Neighboring gene desumoylating isopeptidase 2 Neighboring gene 40S ribosomal protein S29 pseudogene Neighboring gene adenylosuccinate synthase 2 Neighboring gene homeobox protein TGIF2 pseudogene Neighboring gene sperm microtubule inner protein 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in flagellated sperm motility IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sperm capacitation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CatSper complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sperm principal piece IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cation channel sperm-associated protein subunit epsilon

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      4478243..4663260 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015127680.2 → XP_014983166.1  cation channel sperm-associated protein subunit epsilon isoform X4

      UniProtKB/TrEMBL
      F7HTK5
      Conserved Domains (1) summary
      pfam15020
      Location:548 → 733
      CATSPERD; Cation channel sperm-associated protein subunit delta

    2. XM_028849222.1 → XP_028705055.1  cation channel sperm-associated protein subunit epsilon isoform X3

      UniProtKB/TrEMBL
      F7HTK5
      Conserved Domains (1) summary
      pfam15020
      Location:699 → 816
      CATSPERD; Cation channel sperm-associated protein subunit delta

    3. XM_015127663.2 → XP_014983149.2  cation channel sperm-associated protein subunit epsilon isoform X1

      UniProtKB/TrEMBL
      F7HTK5
      Related
      ENSMMUP00000000023.4, ENSMMUT00000000026.4
      Conserved Domains (1) summary
      pfam15020
      Location:699 → 884
      CATSPERD; Cation channel sperm-associated protein subunit delta

    4. XM_028849228.1 → XP_028705061.1  cation channel sperm-associated protein subunit epsilon isoform X4

      UniProtKB/TrEMBL
      F7HTK5
      Conserved Domains (1) summary
      pfam15020
      Location:548 → 733
      CATSPERD; Cation channel sperm-associated protein subunit delta

    5. XM_028849229.1 → XP_028705062.1  cation channel sperm-associated protein subunit epsilon isoform X5

      Conserved Domains (1) summary
      pfam15020
      Location:516 → 701
      CATSPERD; Cation channel sperm-associated protein subunit delta

    6. XM_001089826.4 → XP_001089826.2  cation channel sperm-associated protein subunit epsilon isoform X2

      UniProtKB/TrEMBL
      F6R844, G7MFK6
      Related
      ENSMMUP00000037510.3, ENSMMUT00000044492.3
      Conserved Domains (1) summary
      pfam15020
      Location:699 → 902
      CATSPERD; Cation channel sperm-associated protein subunit delta
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.