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    CNOT1 CCR4-NOT transcription complex subunit 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712880, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CNOT1provided by VGNC
    Official Full Name
    CCR4-NOT transcription complex subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:71386
    See related
    Ensembl:ENSMMUG00000014625
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CNOT1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    49
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (45767685..45879880, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (42739712..42821992, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene GINS complex subunit 3 Neighboring gene NDRG family member 4 Neighboring gene U6 spliceosomal RNA Neighboring gene SET domain containing 6, protein lysine methyltransferase Neighboring gene small nucleolar RNA SNORA46 Neighboring gene small nucleolar RNA SNORA50 Neighboring gene solute carrier family 38 member 7 Neighboring gene glutamic-oxaloacetic transaminase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables molecular adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CCR4-NOT core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CCR4-NOT transcription complex subunit 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      45767685..45879880 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126302.2 → XP_014981788.1  CCR4-NOT transcription complex subunit 1 isoform X1

      UniProtKB/TrEMBL
      G7NPW7
      Conserved Domains (5) summary
      pfam04054
      Location:2005 → 2360
      Not1; CCR4-Not complex component, Not1
      pfam12842
      Location:1389 → 1534
      DUF3819; Domain of unknown function (DUF3819)
      pfam16415
      Location:1088 → 1312
      CNOT1_CAF1_bind; CCR4-NOT transcription complex subunit 1 CAF1-binding domain
      pfam16417
      Location:815 → 1004
      CNOT1_TTP_bind; CCR4-NOT transcription complex subunit 1 TTP binding domain
      pfam16418
      Location:500 → 656
      CNOT1_HEAT; CCR4-NOT transcription complex subunit 1 HEAT repeat

    2. XM_015126307.2 → XP_014981793.1  CCR4-NOT transcription complex subunit 1 isoform X6

      UniProtKB/TrEMBL
      G7NPW7
      Conserved Domains (5) summary
      pfam04054
      Location:1993 → 2348
      Not1; CCR4-Not complex component, Not1
      pfam12842
      Location:1384 → 1529
      DUF3819; Domain of unknown function (DUF3819)
      pfam16415
      Location:1083 → 1307
      CNOT1_CAF1_bind; CCR4-NOT transcription complex subunit 1 CAF1-binding domain
      pfam16417
      Location:815 → 999
      CNOT1_TTP_bind; CCR4-NOT transcription complex subunit 1 TTP binding domain
      pfam16418
      Location:500 → 656
      CNOT1_HEAT; CCR4-NOT transcription complex subunit 1 HEAT repeat

    3. XM_015126305.2 → XP_014981791.1  CCR4-NOT transcription complex subunit 1 isoform X4

      UniProtKB/TrEMBL
      F7GNE7, G7NPW7
      Related
      ENSMMUP00000019196.3, ENSMMUT00000020511.4
      Conserved Domains (5) summary
      pfam04054
      Location:1998 → 2353
      Not1; CCR4-Not complex component, Not1
      pfam12842
      Location:1389 → 1534
      DUF3819; Domain of unknown function (DUF3819)
      pfam16415
      Location:1088 → 1312
      CNOT1_CAF1_bind; CCR4-NOT transcription complex subunit 1 CAF1-binding domain
      pfam16417
      Location:815 → 1004
      CNOT1_TTP_bind; CCR4-NOT transcription complex subunit 1 TTP binding domain
      pfam16418
      Location:500 → 656
      CNOT1_HEAT; CCR4-NOT transcription complex subunit 1 HEAT repeat

    4. XM_015126306.2 → XP_014981792.1  CCR4-NOT transcription complex subunit 1 isoform X5

      UniProtKB/TrEMBL
      G7NPW7
      Conserved Domains (5) summary
      pfam04054
      Location:1997 → 2352
      Not1; CCR4-Not complex component, Not1
      pfam12842
      Location:1388 → 1533
      DUF3819; Domain of unknown function (DUF3819)
      pfam16415
      Location:1087 → 1311
      CNOT1_CAF1_bind; CCR4-NOT transcription complex subunit 1 CAF1-binding domain
      pfam16417
      Location:814 → 1003
      CNOT1_TTP_bind; CCR4-NOT transcription complex subunit 1 TTP binding domain
      pfam16418
      Location:500 → 656
      CNOT1_HEAT; CCR4-NOT transcription complex subunit 1 HEAT repeat

    5. XM_015126303.2 → XP_014981789.1  CCR4-NOT transcription complex subunit 1 isoform X2

      UniProtKB/TrEMBL
      G7NPW7
      Conserved Domains (5) summary
      pfam04054
      Location:2004 → 2359
      Not1; CCR4-Not complex component, Not1
      pfam12842
      Location:1388 → 1533
      DUF3819; Domain of unknown function (DUF3819)
      pfam16415
      Location:1087 → 1311
      CNOT1_CAF1_bind; CCR4-NOT transcription complex subunit 1 CAF1-binding domain
      pfam16417
      Location:814 → 1003
      CNOT1_TTP_bind; CCR4-NOT transcription complex subunit 1 TTP binding domain
      pfam16418
      Location:500 → 656
      CNOT1_HEAT; CCR4-NOT transcription complex subunit 1 HEAT repeat

    6. XM_015126304.2 → XP_014981790.1  CCR4-NOT transcription complex subunit 1 isoform X3

      UniProtKB/TrEMBL
      G7NPW7
      Conserved Domains (5) summary
      pfam04054
      Location:2000 → 2355
      Not1; CCR4-Not complex component, Not1
      pfam12842
      Location:1384 → 1529
      DUF3819; Domain of unknown function (DUF3819)
      pfam16415
      Location:1083 → 1307
      CNOT1_CAF1_bind; CCR4-NOT transcription complex subunit 1 CAF1-binding domain
      pfam16417
      Location:815 → 999
      CNOT1_TTP_bind; CCR4-NOT transcription complex subunit 1 TTP binding domain
      pfam16418
      Location:500 → 656
      CNOT1_HEAT; CCR4-NOT transcription complex subunit 1 HEAT repeat
    Nucleotide Protein
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