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    KDM1B lysine demethylase 1B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704663, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KDM1Bprovided by VGNC
    Official Full Name
    lysine demethylase 1Bprovided by VGNC
    Primary source
    VGNC:VGNC:73878
    See related
    Ensembl:ENSMMUG00000018575
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    AOF1
    Orthologs
    human mouse all
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    Genomic context

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    See KDM1B in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (151744792..151812441, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (18552841..18618680)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 144B Neighboring gene U6 spliceosomal RNA Neighboring gene DEK proto-oncogene Neighboring gene thiopurine S-methyltransferase Neighboring gene NHL repeat containing E3 ubiquitin protein ligase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysine-specific histone demethylase 1B
    XP_028703647.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      151744792..151812441 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028847814.1 → XP_028703647.1  lysine-specific histone demethylase 1B

      UniProtKB/TrEMBL
      F6PQR0, G7MQT4
      Related
      ENSMMUP00000034382.3, ENSMMUT00000041354.3
      Conserved Domains (2) summary
      PLN02328
      Location:302 → 819
      PLN02328; lysine-specific histone demethylase 1 homolog
      pfam07496
      Location:138 → 191
      zf-CW; CW-type Zinc Finger
    Nucleotide Protein
    Heading Accession and Version

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