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    SPICE1 spindle and centriole associated protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709409, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SPICE1provided by VGNC
    Official Full Name
    spindle and centriole associated protein 1provided by VGNC
    Primary source
    VGNC:VGNC:82732
    See related
    Ensembl:ENSMMUG00000013451
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    CCDC52
    Orthologs
    human mouse all
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    Genomic context

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    See SPICE1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (162736843..162801079)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (34482683..34548893, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene SID1 transmembrane family member 1 Neighboring gene uncharacterized LOC114676429 Neighboring gene microRNA mir-4446 Neighboring gene cilia and flagella associated protein 44 Neighboring gene PHD finger-like domain-containing protein 5A pseudogene Neighboring gene hsc70-interacting protein pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in metaphase chromosome alignment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic spindle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of centriole replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centriole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in spindle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spindle and centriole-associated protein 1
    Names
    coiled-coil domain containing 52

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      162736843..162801079
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015129880.2 → XP_014985366.2  spindle and centriole-associated protein 1 isoform X1

      UniProtKB/TrEMBL
      F6YGX6, H9Z5N8
      Related
      ENSMMUP00000017681.4, ENSMMUT00000018880.4
      Conserved Domains (1) summary
      pfam15678
      Location:34 → 434
      SPICE; Centriole duplication and mitotic chromosome congression

    2. XM_028844617.1 → XP_028700450.1  spindle and centriole-associated protein 1 isoform X2

      UniProtKB/TrEMBL
      H9Z5N8
      Conserved Domains (1) summary
      pfam15678
      Location:34 → 388
      SPICE; Centriole duplication and mitotic chromosome congression

    3. XM_015129882.2 → XP_014985368.2  spindle and centriole-associated protein 1 isoform X1

      UniProtKB/TrEMBL
      F6YGX6, H9Z5N8
      Conserved Domains (1) summary
      pfam15678
      Location:34 → 434
      SPICE; Centriole duplication and mitotic chromosome congression
    Nucleotide Protein
    Heading Accession and Version

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