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    ATP13A4 ATPase 13A4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698284, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ATP13A4provided by VGNC
    Official Full Name
    ATPase 13A4provided by VGNC
    Primary source
    VGNC:VGNC:70129
    See related
    Ensembl:ENSMMUG00000009764
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATP13A4 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (4391305..4558823)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (200168005..200333124, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676202 Neighboring gene OPA1 mitochondrial dynamin like GTPase Neighboring gene uncharacterized LOC106997184 Neighboring gene ATPase 13A5 Neighboring gene uncharacterized LOC114676203 Neighboring gene phospholipase A and acyltransferase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATPase-coupled monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables P-type ion transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables polyamine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in polyamine transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in late endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable cation-transporting ATPase 13A4
    Names
    putative cation-transporting ATPase 13A4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      4391305..4558823
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015132516.2 → XP_014988002.2  probable cation-transporting ATPase 13A4 isoform X2

      UniProtKB/TrEMBL
      G7MK98
      Related
      ENSMMUP00000012772.4, ENSMMUT00000013632.4
      Conserved Domains (2) summary
      cd07542
      Location:173 → 1015
      P-type_ATPase_cation; P-type cation-transporting ATPases, similar to human ATPase type 13A2 (ATP13A2) protein and Saccharomyces cerevisiae Ypk9p
      pfam12409
      Location:16 → 136
      P5-ATPase; P5-type ATPase cation transporter

    2. XM_015132515.2 → XP_014988001.2  probable cation-transporting ATPase 13A4 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QK41, G7MK98
      Related
      ENSMMUP00000048414.2, ENSMMUT00000060544.2
      Conserved Domains (2) summary
      cd07542
      Location:197 → 1039
      P-type_ATPase_cation; P-type cation-transporting ATPases, similar to human ATPase type 13A2 (ATP13A2) protein and Saccharomyces cerevisiae Ypk9p
      pfam12409
      Location:41 → 160
      P5-ATPase; P5-type ATPase cation transporter

    3. XM_028843561.1 → XP_028699394.1  probable cation-transporting ATPase 13A4 isoform X4

      UniProtKB/TrEMBL
      G7MK98, H9G0M8
      Conserved Domains (2) summary
      cd07542
      Location:197 → 1039
      P-type_ATPase_cation; P-type cation-transporting ATPases, similar to human ATPase type 13A2 (ATP13A2) protein and Saccharomyces cerevisiae Ypk9p
      pfam12409
      Location:41 → 160
      P5-ATPase; P5-type ATPase cation transporter

    4. XM_015132517.2 → XP_014988003.2  probable cation-transporting ATPase 13A4 isoform X3

      UniProtKB/TrEMBL
      G7MK98
      Conserved Domains (2) summary
      cd07542
      Location:197 → 994
      P-type_ATPase_cation; P-type cation-transporting ATPases, similar to human ATPase type 13A2 (ATP13A2) protein and Saccharomyces cerevisiae Ypk9p
      pfam12409
      Location:41 → 160
      P5-ATPase; P5-type ATPase cation transporter

    5. XM_015132518.2 → XP_014988004.2  probable cation-transporting ATPase 13A4 isoform X5

      Conserved Domains (2) summary
      cd07542
      Location:197 → 938
      P-type_ATPase_cation; P-type cation-transporting ATPases, similar to human ATPase type 13A2 (ATP13A2) protein and Saccharomyces cerevisiae Ypk9p
      pfam12409
      Location:41 → 160
      P5-ATPase; P5-type ATPase cation transporter
    Nucleotide Protein
    Heading Accession and Version

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