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    SLC39A13 solute carrier family 39 member 13 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713420, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC39A13provided by VGNC
    Official Full Name
    solute carrier family 39 member 13provided by VGNC
    Primary source
    VGNC:VGNC:77538
    See related
    Ensembl:ENSMMUG00000015607
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SLC39A13 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (18344393..18405628, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (18607491..18670781, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene receptor associated protein of the synapse Neighboring gene proteasome 26S subunit, ATPase 3 Neighboring gene uncharacterized LOC114672262 Neighboring gene Spi-1 proto-oncogene Neighboring gene myosin binding protein C3 Neighboring gene MAP kinase activating death domain

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular zinc ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in zinc ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc transporter ZIP13
    Names
    solute carrier family 39 (zinc transporter), member 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266399.1 → NP_001253328.1  zinc transporter ZIP13 precursor

      See identical proteins and their annotated locations for NP_001253328.1

      Status: PROVISIONAL

      Source sequence(s)
      JU321503
      UniProtKB/TrEMBL
      A0A1D5QXH1, A0A1D5RGA4, H9ESA0
      Related
      ENSMMUP00000052751.2, ENSMMUT00000067950.2
      Conserved Domains (1) summary
      pfam02535
      Location:65 → 358
      Zip; ZIP Zinc transporter

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      18344393..18405628 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028832707.1 → XP_028688540.1  zinc transporter ZIP13 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RGA4
      Conserved Domains (1) summary
      pfam02535
      Location:65 → 379
      Zip; ZIP Zinc transporter

    2. XM_015114193.2 → XP_014969679.1  zinc transporter ZIP13 isoform X4

      UniProtKB/TrEMBL
      A0A1D5RGA4
      Conserved Domains (1) summary
      pfam02535
      Location:65 → 298
      Zip; ZIP Zinc transporter

    3. XM_015114189.2 → XP_014969675.2  zinc transporter ZIP13 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RGA4
      Conserved Domains (1) summary
      pfam02535
      Location:65 → 379
      Zip; ZIP Zinc transporter

    4. XM_015114192.2 → XP_014969678.1  zinc transporter ZIP13 isoform X3

      UniProtKB/TrEMBL
      A0A1D5RGA4, F6T5L6
      Related
      ENSMMUP00000020480.4, ENSMMUT00000021895.4
      Conserved Domains (1) summary
      pfam02535
      Location:65 → 322
      Zip; ZIP Zinc transporter

    5. XM_015114191.2 → XP_014969677.2  zinc transporter ZIP13 isoform X2

      UniProtKB/TrEMBL
      A0A1D5RGA4
      Conserved Domains (1) summary
      pfam02535
      Location:65 → 343
      Zip; ZIP Zinc transporter

    6. XM_028832710.1 → XP_028688543.1  zinc transporter ZIP13 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RGA4
      Conserved Domains (1) summary
      pfam02535
      Location:65 → 379
      Zip; ZIP Zinc transporter

    7. XM_028832709.1 → XP_028688542.1  zinc transporter ZIP13 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RGA4
      Conserved Domains (1) summary
      pfam02535
      Location:65 → 379
      Zip; ZIP Zinc transporter

    8. XM_028832708.1 → XP_028688541.1  zinc transporter ZIP13 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RGA4
      Conserved Domains (1) summary
      pfam02535
      Location:65 → 379
      Zip; ZIP Zinc transporter
    Nucleotide Protein
    Heading Accession and Version

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