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    ITGA7 integrin subunit alpha 7 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707279, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ITGA7provided by VGNC
    Official Full Name
    integrin subunit alpha 7provided by VGNC
    Primary source
    VGNC:VGNC:73781
    See related
    Ensembl:ENSMMUG00000013226
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ITGA7 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (55246458..55267826, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (54409542..54434607, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene proteasome subunit beta type-3 pseudogene Neighboring gene interferon-inducible double-stranded RNA-dependent protein kinase activator A pseudogene Neighboring gene thiol methyltransferase 1B Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 1 Neighboring gene retinol dehydrogenase 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables integrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell adhesion mediated by integrin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-matrix adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in integrin-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in leukocyte migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of integrin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    integrin alpha-7
    Names
    integrin alpha-7 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      55246458..55267826 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028829582.1 → XP_028685415.1  integrin alpha-7 isoform X3

      UniProtKB/TrEMBL
      A0A1D5QL76
      Related
      ENSMMUP00000048801.2, ENSMMUT00000068919.2
      Conserved Domains (2) summary
      smart00191
      Location:377 → 429
      Int_alpha; Integrin alpha (beta-propellor repeats)
      pfam08441
      Location:471 → 962
      Integrin_alpha2; Integrin alpha

    2. XM_028829581.1 → XP_028685414.1  integrin alpha-7 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QL76, F6X6S0
      Related
      ENSMMUP00000017374.4, ENSMMUT00000018551.4
      Conserved Domains (2) summary
      smart00191
      Location:381 → 433
      Int_alpha; Integrin alpha (beta-propellor repeats)
      pfam08441
      Location:475 → 966
      Integrin_alpha2; Integrin alpha

    3. XM_028829580.1 → XP_028685413.1  integrin alpha-7 isoform X1

      UniProtKB/TrEMBL
      A0A1D5R9N4
      Conserved Domains (2) summary
      smart00191
      Location:381 → 433
      Int_alpha; Integrin alpha (beta-propellor repeats)
      pfam08441
      Location:475 → 966
      Integrin_alpha2; Integrin alpha

    4. XM_028829584.1 → XP_028685417.1  integrin alpha-7 isoform X5

      UniProtKB/TrEMBL
      A0A1D5QL76, G7N795
      Conserved Domains (2) summary
      smart00191
      Location:421 → 473
      Int_alpha; Integrin alpha (beta-propellor repeats)
      pfam08441
      Location:515 → 1006
      Integrin_alpha2; Integrin alpha

    5. XM_028829583.1 → XP_028685416.1  integrin alpha-7 isoform X4

      Conserved Domains (2) summary
      smart00191
      Location:166 → 218
      Int_alpha; Integrin alpha (beta-propellor repeats)
      pfam08441
      Location:260 → 751
      Integrin_alpha2; Integrin alpha
    Nucleotide Protein
    Heading Accession and Version

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