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    TTC3 tetratricopeptide repeat domain 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694206, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TTC3provided by VGNC
    Official Full Name
    tetratricopeptide repeat domain 3provided by VGNC
    Primary source
    VGNC:VGNC:81785
    See related
    Ensembl:ENSMMUG00000017505
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TTC3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    46
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (9418807..9539049, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (9543324..9664201, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106997248 Neighboring gene Down syndrome critical region protein 9-like Neighboring gene uncharacterized LOC106997249 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC106997250 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class P Neighboring gene microRNA mir-548i

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase TTC3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      9418807..9539049 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015132904.2 → XP_014988390.1  E3 ubiquitin-protein ligase TTC3

      UniProtKB/TrEMBL
      F6V479
      Related
      ENSMMUP00000023038.4, ENSMMUT00000024613.4
      Conserved Domains (3) summary
      sd00006
      Location:232 → 259
      TPR; TPR repeat [structural motif]
      pfam13414
      Location:232 → 291
      TPR_11; TPR repeat
      pfam13639
      Location:1951 → 1991
      zf-RING_2; Ring finger domain
    Nucleotide Protein
    Heading Accession and Version

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