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    TNFRSF13B TNF receptor superfamily member 13B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 574200, updated on 5-Mar-2024

    Summary

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    Gene symbol
    TNFRSF13B
    Gene description
    TNF receptor superfamily member 13B
    See related
    Ensembl:ENSMMUG00000005378
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    NF-AT
    Orthologs
    human mouse all
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    Genomic context

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    See TNFRSF13B in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (16763444..16794699, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (17068332..17099558, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673068 Neighboring gene TBC1 domain family member 26-like Neighboring gene uncharacterized LOC114673069 Neighboring gene myosin phosphatase Rho interacting protein Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tumor necrosis factor receptor superfamily member 13B
    Names
    transmembrane activator
    tumor necrosis factor receptor superfamily, member 13B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      16763444..16794699 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015118722.2 → XP_014974208.1  tumor necrosis factor receptor superfamily member 13B isoform X1

      UniProtKB/TrEMBL
      F7GUL9, G7NJ10
      Related
      ENSMMUP00000007111.4, ENSMMUT00000007568.4
      Conserved Domains (1) summary
      cd13415
      Location:34 → 245
      TNFRSF13B; Tumor necrosis factor receptor superfamily member 13B (TNFRSF13B), also known as transmembrane activator and calcium modulator and cyclophilin ligand interactor (TACI)

    2. XM_015118723.2 → XP_014974209.1  tumor necrosis factor receptor superfamily member 13B isoform X2

      Conserved Domains (1) summary
      cd13415
      Location:22 → 199
      TNFRSF13B; Tumor necrosis factor receptor superfamily member 13B (TNFRSF13B), also known as transmembrane activator and calcium modulator and cyclophilin ligand interactor (TACI)

    3. XM_028836059.1 → XP_028691892.1  tumor necrosis factor receptor superfamily member 13B isoform X3

      Conserved Domains (1) summary
      cd13415
      Location:13 → 188
      TNFRSF13B; Tumor necrosis factor receptor superfamily member 13B (TNFRSF13B), also known as transmembrane activator and calcium modulator and cyclophilin ligand interactor (TACI)
    Nucleotide Protein
    Heading Accession and Version

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