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    DMBT1 deleted in malignant brain tumors 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 574192, updated on 5-Mar-2024

    Summary

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    Gene symbol
    DMBT1
    Gene description
    deleted in malignant brain tumors 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DMBT1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    41
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (123054305..123127092)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (118564017..118659182)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene age-related maculopathy susceptibility 2 Neighboring gene HtrA serine peptidase 1 Neighboring gene carbohydrate-binding protein AQN-1-like Neighboring gene chromosome 9 C10orf120 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The 5' flanking region of the Rhesus monkey H3 (DMBT1) gene contains putative progesterone response elements. Ace CI, et al. DNA Cell Biol, 2005 Jun. PMID 15941386
    2. A progesterone-induced endometrial homolog of a new candidate tumor suppressor, DMBT1. Ace CI, et al. J Clin Endocrinol Metab, 1998 Oct. PMID 9768666
    3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Six putative progesterone receptor binding sites were identified in the 5'-upstream region.
      Title: The 5' flanking region of the Rhesus monkey H3 (DMBT1) gene contains putative progesterone response elements.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: deleted in malignant brain tumors 1 protein
    Names
    deleted in malignant brain tumors 1 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      123054305..123127092
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028826966.1 → XP_028682799.1  LOW QUALITY PROTEIN: deleted in malignant brain tumors 1 protein

      Conserved Domains (3) summary
      smart00202
      Location:388 → 488
      SR; Scavenger receptor Cys-rich
      cd00041
      Location:1351 → 1461
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      pfam00100
      Location:1712 → 1959
      Zona_pellucida; Zona pellucida-like domain
    Nucleotide Protein
    Heading Accession and Version

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