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    TTC17 tetratricopeptide repeat domain 17 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716254, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TTC17provided by VGNC
    Official Full Name
    tetratricopeptide repeat domain 17provided by VGNC
    Primary source
    VGNC:VGNC:79516
    Locus tag
    EGK_06337
    See related
    Ensembl:ENSMMUG00000000844
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TTC17 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (22233663..22372911, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (22581855..22729643, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-670 Neighboring gene C-terminal-binding protein 2 pseudogene Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene uncharacterized LOC106993251 Neighboring gene apoptosis inhibitor 5 Neighboring gene heterogeneous nuclear ribonucleoprotein K pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cilium organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetratricopeptide repeat protein 17
    Names
    Tetratricopeptide repeat protein 17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      22233663..22372911 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015114424.2 → XP_014969910.1  tetratricopeptide repeat protein 17 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RBT9, A0A5F8A6G8
      Related
      ENSMMUP00000057780.1, ENSMMUT00000079057.2
      Conserved Domains (6) summary
      smart00028
      Location:689 → 718
      TPR; Tetratricopeptide repeats
      sd00006
      Location:621 → 647
      TPR; TPR repeat [structural motif]
      pfam00515
      Location:1145 → 1175
      TPR_1; Tetratricopeptide repeat
      pfam13414
      Location:1111 → 1173
      TPR_11; TPR repeat
      cd16269
      Location:379 → 390
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:329 → 410
      GBP_C; Guanylate-binding protein, C-terminal domain

    2. XM_015114425.2 → XP_014969911.1  tetratricopeptide repeat protein 17 isoform X2

      UniProtKB/TrEMBL
      A0A5F8A6G8, A0A663DG63, A0A8J8Y4I9, F6TGG5, G7NDJ6
      Related
      ENSMMUP00000001140.3, ENSMMUT00000001214.4
      Conserved Domains (6) summary
      smart00028
      Location:689 → 718
      TPR; Tetratricopeptide repeats
      sd00006
      Location:621 → 647
      TPR; TPR repeat [structural motif]
      pfam00515
      Location:1088 → 1118
      TPR_1; Tetratricopeptide repeat
      pfam13414
      Location:1054 → 1116
      TPR_11; TPR repeat
      cd16269
      Location:379 → 390
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:329 → 410
      GBP_C; Guanylate-binding protein, C-terminal domain

    3. XM_015114426.2 → XP_014969912.1  tetratricopeptide repeat protein 17 isoform X3

      UniProtKB/TrEMBL
      F6TGF9
      Related
      ENSMMUP00000001141.3, ENSMMUT00000001215.4
      Conserved Domains (5) summary
      smart00028
      Location:689 → 718
      TPR; Tetratricopeptide repeats
      sd00006
      Location:621 → 647
      TPR; TPR repeat [structural motif]
      pfam13414
      Location:658 → 718
      TPR_11; TPR repeat
      cd16269
      Location:379 → 390
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:329 → 410
      GBP_C; Guanylate-binding protein, C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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