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    CFAP36 cilia and flagella associated protein 36 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 677698, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CFAP36provided by VGNC
    Official Full Name
    cilia and flagella associated protein 36provided by VGNC
    Primary source
    VGNC:VGNC:71142
    See related
    Ensembl:ENSMMUG00000007000
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    CCDC104
    Orthologs
    human mouse all
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    Genomic context

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    See CFAP36 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (53103350..53131710, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (56496406..56523350)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene polyribonucleotide nucleotidyltransferase 1 Neighboring gene protein phosphatase 4 regulatory subunit 3B Neighboring gene small nucleolar RNA SNORA12 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Form deprivation modulates retinal neurogenesis in primate experimental myopia. Tkatchenko AV, et al. Proc Natl Acad Sci U S A, 2006 Mar 21. PMID 16537371, Free PMC Article
    2. Analysis of the Macaca mulatta transcriptome and the sequence divergence between Macaca and human. Magness CL, et al. Genome Biol, 2005. PMID 15998449, Free PMC Article
    3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary base IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cilia- and flagella-associated protein 36
    Names
    coiled-coil domain containing 104
    coiled-coil domain-containing protein 104

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001190915.2 → NP_001177844.2  cilia- and flagella-associated protein 36

      Status: VALIDATED

      Source sequence(s)
      QNVO02000094
      UniProtKB/TrEMBL
      A0A1D5Q1F0, F6ZYI0
      Related
      ENSMMUP00000009184.3, ENSMMUT00000009779.4
      Conserved Domains (1) summary
      pfam11527
      Location:10 → 119
      ARL2_Bind_BART; The ARF-like 2 binding protein BART

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      53103350..53131710 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112352.2 → XP_014967838.2  cilia- and flagella-associated protein 36 isoform X1

      UniProtKB/TrEMBL
      A0A5F8ACN3, F6ZYI0
      Related
      ENSMMUP00000074731.1, ENSMMUT00000093245.1
      Conserved Domains (1) summary
      pfam11527
      Location:13 → 119
      ARL2_Bind_BART; The ARF-like 2 binding protein BART
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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