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    RHOT1 ras homolog family member T1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717901, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RHOT1provided by VGNC
    Official Full Name
    ras homolog family member T1provided by VGNC
    Primary source
    VGNC:VGNC:76795
    Locus tag
    EGK_08377
    See related
    Ensembl:ENSMMUG00000018222
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RHOT1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (28561606..28669270)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (26189112..26241508)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S27-like Neighboring gene ArfGAP with dual PH domains 2 Neighboring gene divergent paired-related homeobox-like Neighboring gene uncharacterized LOC114673091 Neighboring gene ring finger protein 135 Neighboring gene rhomboid like 3 Neighboring gene 40S ribosomal protein S17 Neighboring gene chromosome 16 C17orf75 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrion organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in small GTPase-mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial Rho GTPase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      28561606..28669270
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028836194.1 → XP_028692027.1  mitochondrial Rho GTPase 1 isoform X5

      UniProtKB/TrEMBL
      F6V3Q2, H9ENC5
      Related
      ENSMMUP00000035015.3, ENSMMUT00000042011.3
      Conserved Domains (4) summary
      cd01892
      Location:428 → 593
      Miro2; Mitochondrial Rho family 2 (Miro2), C-terminal
      cd01893
      Location:16 → 182
      Miro1; Mitochondrial Rho family 1 (Miro1), N-terminal
      pfam08355
      Location:354 → 423
      EF_assoc_1; EF hand associated
      pfam08356
      Location:232 → 316
      EF_assoc_2; EF hand associated

    2. XM_028836195.1 → XP_028692028.1  mitochondrial Rho GTPase 1 isoform X6

      UniProtKB/TrEMBL
      H9ENC6
      Conserved Domains (4) summary
      cd01892
      Location:428 → 594
      Miro2; Mitochondrial Rho family 2 (Miro2), C-terminal
      cd01893
      Location:16 → 182
      Miro1; Mitochondrial Rho family 1 (Miro1), N-terminal
      pfam08355
      Location:354 → 423
      EF_assoc_1; EF hand associated
      pfam08356
      Location:232 → 316
      EF_assoc_2; EF hand associated

    3. XM_028836196.1 → XP_028692029.1  mitochondrial Rho GTPase 1 isoform X7

      UniProtKB/TrEMBL
      F6V3R1, H9ENC4
      Related
      ENSMMUP00000035014.3, ENSMMUT00000042010.3
      Conserved Domains (4) summary
      cd01892
      Location:428 → 605
      Miro2; Mitochondrial Rho family 2 (Miro2), C-terminal
      cd01893
      Location:16 → 182
      Miro1; Mitochondrial Rho family 1 (Miro1), N-terminal
      pfam08355
      Location:354 → 423
      EF_assoc_1; EF hand associated
      pfam08356
      Location:232 → 316
      EF_assoc_2; EF hand associated

    4. XM_028836191.1 → XP_028692024.1  mitochondrial Rho GTPase 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5R439, F6WI26
      Related
      ENSMMUP00000023164.4, ENSMMUT00000024751.4
      Conserved Domains (4) summary
      cd01892
      Location:428 → 593
      Miro2; Mitochondrial Rho family 2 (Miro2), C-terminal
      cd01893
      Location:16 → 182
      Miro1; Mitochondrial Rho family 1 (Miro1), N-terminal
      pfam08355
      Location:354 → 423
      EF_assoc_1; EF hand associated
      pfam08356
      Location:232 → 316
      EF_assoc_2; EF hand associated

    5. XM_028836190.1 → XP_028692023.1  mitochondrial Rho GTPase 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QL28, A0A5S6RBU6, A0A8J8YB97, G7NGU1, H9ENC5
      Related
      ENSMMUP00000048753.2, ENSMMUT00000079035.2
      Conserved Domains (4) summary
      cd01892
      Location:428 → 593
      Miro2; Mitochondrial Rho family 2 (Miro2), C-terminal
      cd01893
      Location:16 → 182
      Miro1; Mitochondrial Rho family 1 (Miro1), N-terminal
      pfam08355
      Location:354 → 423
      EF_assoc_1; EF hand associated
      pfam08356
      Location:232 → 316
      EF_assoc_2; EF hand associated

    6. XM_028836193.1 → XP_028692026.1  mitochondrial Rho GTPase 1 isoform X4

      UniProtKB/TrEMBL
      F7E515, H9ENC4
      Related
      ENSMMUP00000023963.4, ENSMMUT00000025612.4
      Conserved Domains (4) summary
      cd01892
      Location:428 → 593
      Miro2; Mitochondrial Rho family 2 (Miro2), C-terminal
      cd01893
      Location:16 → 182
      Miro1; Mitochondrial Rho family 1 (Miro1), N-terminal
      pfam08355
      Location:354 → 423
      EF_assoc_1; EF hand associated
      pfam08356
      Location:232 → 316
      EF_assoc_2; EF hand associated

    7. XM_028836192.1 → XP_028692025.1  mitochondrial Rho GTPase 1 isoform X3

      UniProtKB/TrEMBL
      H9ENC6
      Related
      ENSMMUP00000055075.2, ENSMMUT00000072359.2
      Conserved Domains (4) summary
      cd01892
      Location:428 → 594
      Miro2; Mitochondrial Rho family 2 (Miro2), C-terminal
      cd01893
      Location:16 → 182
      Miro1; Mitochondrial Rho family 1 (Miro1), N-terminal
      pfam08355
      Location:354 → 423
      EF_assoc_1; EF hand associated
      pfam08356
      Location:232 → 316
      EF_assoc_2; EF hand associated

    RNA

    1. XR_003723688.1 RNA Sequence

    2. XR_003723689.1 RNA Sequence

    3. XR_003723687.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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