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    ATF2 activating transcription factor 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699072, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ATF2provided by VGNC
    Official Full Name
    activating transcription factor 2provided by VGNC
    Primary source
    VGNC:VGNC:70169
    See related
    Ensembl:ENSMMUG00000003947
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATF2 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (62199545..62290946, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (62111193..62201944, complement)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106992620 Neighboring gene microRNA mir-933 Neighboring gene ATP synthase membrane subunit c locus 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cAMP response element binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cyclic AMP-dependent transcription factor ATF-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      62199545..62290946 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028830861.1 → XP_028686694.1  cyclic AMP-dependent transcription factor ATF-2 isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q991, A0A1D5QNA4
      Related
      ENSMMUP00000049530.2, ENSMMUT00000075028.2
      Conserved Domains (3) summary
      cd12192
      Location:9 → 44
      GCN4_cent; GCN4 central activation domain-like acidic activation domain
      PRK14951
      Location:144 → 272
      PRK14951; DNA polymerase III subunits gamma and tau; Provisional
      cd14687
      Location:296 → 356
      bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain

    2. XM_028830859.1 → XP_028686692.1  cyclic AMP-dependent transcription factor ATF-2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q991, A0A1D5QK74, A0A5S6RBC2, A0A8J8Y447, F6ZGE7, G7N8C8
      Related
      ENSMMUP00000048447.2, ENSMMUT00000058677.2
      Conserved Domains (4) summary
      cd12192
      Location:65 → 102
      GCN4_cent; GCN4 central activation domain-like acidic activation domain
      cd14687
      Location:354 → 414
      bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
      sd00019
      Location:27 → 49
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam05109
      Location:90 → 342
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

    3. XM_015110404.2 → XP_014965890.2  cyclic AMP-dependent transcription factor ATF-2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q991, A0A1D5QK74, A0A5S6RBC2, A0A8J8Y447, F6ZGE7, G7N8C8
      Related
      ENSMMUP00000005272.4, ENSMMUT00000005599.4
      Conserved Domains (4) summary
      cd12192
      Location:65 → 102
      GCN4_cent; GCN4 central activation domain-like acidic activation domain
      cd14687
      Location:354 → 414
      bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
      sd00019
      Location:27 → 49
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam05109
      Location:90 → 342
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

    4. XM_028830860.1 → XP_028686693.1  cyclic AMP-dependent transcription factor ATF-2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QX03
      Related
      ENSMMUP00000052583.1, ENSMMUT00000076913.2
      Conserved Domains (4) summary
      cd12192
      Location:65 → 102
      GCN4_cent; GCN4 central activation domain-like acidic activation domain
      cd14687
      Location:354 → 414
      bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
      sd00019
      Location:27 → 49
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam05109
      Location:90 → 342
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

    5. XM_028830862.1 → XP_028686695.1  cyclic AMP-dependent transcription factor ATF-2 isoform X4

      Related
      ENSMMUP00000056470.2, ENSMMUT00000076073.2
      Conserved Domains (4) summary
      cd12192
      Location:65 → 102
      GCN4_cent; GCN4 central activation domain-like acidic activation domain
      cd14687
      Location:354 → 414
      bZIP_ATF2; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain
      sd00019
      Location:27 → 49
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam05109
      Location:90 → 342
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

    RNA

    1. XR_003721316.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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