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    HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 [ Homo sapiens (human) ]

    Gene ID: 51478, updated on 27-Nov-2024

    Summary

    Official Symbol
    HSD17B7provided by HGNC
    Official Full Name
    hydroxysteroid 17-beta dehydrogenase 7provided by HGNC
    Primary source
    HGNC:HGNC:5215
    See related
    Ensembl:ENSG00000132196 MIM:606756; AllianceGenome:HGNC:5215
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    PRAP; SDR37C1
    Summary
    HSD17B7 encodes an enzyme that functions both as a 17-beta-hydroxysteroid dehydrogenase (EC 1.1.1.62) in the biosynthesis of sex steroids and as a 3-ketosteroid reductase (EC 1.1.1.270) in the biosynthesis of cholesterol (Marijanovic et al., 2003 [PubMed 12829805]).[supplied by OMIM, May 2010]
    Expression
    Ubiquitous expression in adrenal (RPKM 6.0), lymph node (RPKM 4.5) and 25 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See HSD17B7 in Genome Data Viewer
    Location:
    1q23.3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (162790702..162812823)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (162134938..162157387)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (162760492..162782613)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1493 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1494 Neighboring gene UDP-N-acetylglucosamine pyrophosphorylase 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2010 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2011 Neighboring gene discoidin domain receptor tyrosine kinase 2 Neighboring gene Sharpr-MPRA regulatory region 4859 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1495 Neighboring gene MPRA-validated peak435 silencer Neighboring gene RNA, 7SL, cytoplasmic 861, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:162792375-162792980 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2012 Neighboring gene Sharpr-MPRA regulatory region 14373 Neighboring gene coiled-coil domain containing 190 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr1:162947871-162948547 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:162948548-162949223 Neighboring gene cytochrome c oxidase subunit 7B, mitochondrial-like

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC12523, MGC75018

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in androgen metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cholesterol biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cholesterol biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cholesterol biosynthetic process TAS
    Traceable Author Statement
    more info
     
    involved_in estrogen biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in estrogen biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum membrane TAS
    Traceable Author Statement
    more info
     
    located_in mitochondrion HTP PubMed 

    General protein information

    Preferred Names
    3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7
    Names
    17 beta-hydroxysteroid dehydrogenase type VII
    17-beta-HSD 7
    17-beta-hydroxysteroid dehydrogenase 7
    17beta hydroxysteroid dehydrogenase
    3-keto-steroid reductase
    dihydrotestosterone oxidoreductase
    estradiol 17-beta-dehydrogenase 7
    short chain dehydrogenase/reductase family 37C member 1
    NP_001291441.1
    NP_001291442.1
    NP_057455.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001304512.2NP_001291441.1  3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 isoform 2

      See identical proteins and their annotated locations for NP_001291441.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 3' UTR and coding sequence compared to variant 1. The resulting isoform (2) has a shorter and distinct C-terminus compared to isoform 1.
      Source sequence(s)
      AL445197
      UniProtKB/TrEMBL
      Q9H9C0
      Conserved Domains (1) summary
      cl21454
      Location:2153
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    2. NM_001304513.2NP_001291442.1  3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 isoform 3

      See identical proteins and their annotated locations for NP_001291442.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in the 3' UTR and coding sequence compared to variant 1. The resulting isoform (3) has a shorter and distinct C-terminus compared to isoform 1.
      Source sequence(s)
      AL445197
      UniProtKB/Swiss-Prot
      P56937
      UniProtKB/TrEMBL
      Q5T248
      Conserved Domains (1) summary
      cl21454
      Location:2110
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    3. NM_016371.4NP_057455.1  3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 isoform 1

      See identical proteins and their annotated locations for NP_057455.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
      Source sequence(s)
      AL392003, AL445197
      Consensus CDS
      CCDS1242.1
      UniProtKB/Swiss-Prot
      P56937, Q5T246, Q7Z4V9, Q8WWS2, Q9UF00
      Related
      ENSP00000254521.3, ENST00000254521.8
      Conserved Domains (1) summary
      cd08941
      Location:2280
      3KS_SDR_c; 3-keto steroid reductase, classical (c) SDRs

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      162790702..162812823
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007060779.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      162134938..162157387
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_008486066.1 RNA Sequence