U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    EHD1 EH domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 722036, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    EHD1provided by VGNC
    Official Full Name
    EH domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:72175
    Locus tag
    EGK_06040
    See related
    Ensembl:ENSMMUG00000003972
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    Testilin
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See EHD1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (9657305..9685101)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (9579388..9606941)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-194-2 Neighboring gene microRNA mir-192 Neighboring gene uncharacterized LOC114672235 Neighboring gene CDC42 binding protein kinase gamma Neighboring gene menin 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables molecular adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in clathrin-dependent synaptic vesicle endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endosomal transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in clathrin-coated pit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intracellular vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in presynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    EH domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261195.1 → NP_001248124.1  EH domain-containing protein 1

      See identical proteins and their annotated locations for NP_001248124.1

      Status: PROVISIONAL

      Source sequence(s)
      JV043257
      UniProtKB/TrEMBL
      A0A1D5Q525, A0A5F8AGH0, A0A8J8XE44, G7NCH3
      Related
      ENSMMUP00000076041.1, ENSMMUT00000105617.1
      Conserved Domains (4) summary
      smart00027
      Location:438 → 531
      EH; Eps15 homology domain
      cd09913
      Location:60 → 300
      EHD; Eps15 homology domain (EHD), C-terminal domain
      pfam16880
      Location:24 → 56
      EHD_N; N-terminal EH-domain containing protein
      pfam18150
      Location:288 → 394
      DUF5600; Domain of unknown function (DUF5600)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      9657305..9685101
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015113763.2 → XP_014969249.1  EH domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q525, F6XYM2
      Related
      ENSMMUP00000005300.2, ENSMMUT00000005630.3
      Conserved Domains (3) summary
      smart00027
      Location:452 → 545
      EH; Eps15 homology domain
      cd09913
      Location:74 → 314
      EHD; Eps15 homology domain (EHD), C-terminal domain
      pfam16880
      Location:39 → 70
      EHD_N; N-terminal EH-domain containing protein

    2. XM_015113764.2 → XP_014969250.1  EH domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q525, A0A5F8AGH0, A0A8J8XE44, G7NCH3
      Conserved Domains (4) summary
      smart00027
      Location:438 → 531
      EH; Eps15 homology domain
      cd09913
      Location:60 → 300
      EHD; Eps15 homology domain (EHD), C-terminal domain
      pfam16880
      Location:24 → 56
      EHD_N; N-terminal EH-domain containing protein
      pfam18150
      Location:288 → 394
      DUF5600; Domain of unknown function (DUF5600)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials