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    DTX1 deltex E3 ubiquitin ligase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714297, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DTX1provided by VGNC
    Official Full Name
    deltex E3 ubiquitin ligase 1provided by VGNC
    Primary source
    VGNC:VGNC:108340
    See related
    Ensembl:ENSMMUG00000054690
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DTX1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (112770079..112811566)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (113087426..113128844)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene 2'-5'-oligoadenylate synthetase 2 Neighboring gene mitochondrial inner membrane protease subunit 1 pseudogene Neighboring gene uncharacterized LOC114670954 Neighboring gene RAS protein activator like 1 Neighboring gene cilia and flagella associated protein 73 Neighboring gene DEAD-box helicase 54

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Notch signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase DTX1
    Names
    protein deltex-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      112770079..112811566
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015152877.2 → XP_015008363.1  E3 ubiquitin-protein ligase DTX1

      UniProtKB/TrEMBL
      A0A5F7ZGN5
      Related
      ENSMMUP00000064788.1, ENSMMUT00000102341.1
      Conserved Domains (3) summary
      smart00678
      Location:26 → 102
      WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
      pfam18102
      Location:481 → 615
      DTC; Deltex C-terminal domain
      cd16671
      Location:410 → 478
      RING-H2_DTX1_4; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase deltex1 (DTX1), deltex4 (DTX4), and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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