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    CHERP calcium homeostasis endoplasmic reticulum protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718689, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CHERPprovided by VGNC
    Official Full Name
    calcium homeostasis endoplasmic reticulum proteinprovided by VGNC
    Primary source
    VGNC:VGNC:70960
    See related
    Ensembl:ENSMMUG00000012958
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CHERP in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (16031798..16056661, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (16474839..16499283, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene epidermal growth factor receptor pathway substrate 15 like 1 Neighboring gene calreticulin 3 Neighboring gene chromosome 19 C19orf44 homolog Neighboring gene solute carrier family 35 member E1 Neighboring gene mediator complex subunit 26

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in perinuclear region of cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calcium homeostasis endoplasmic reticulum protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      16031798..16056661 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001112800.4 → XP_001112800.2  calcium homeostasis endoplasmic reticulum protein isoform X2

      UniProtKB/TrEMBL
      F7GVS3, I2CV14
      Related
      ENSMMUP00000017007.4, ENSMMUT00000018168.4
      Conserved Domains (3) summary
      smart00443
      Location:839 → 889
      G_patch; glycine rich nucleic binding domain
      smart00648
      Location:13 → 65
      SWAP; Suppressor-of-White-APricot splicing regulator
      pfam04818
      Location:212 → 271
      CTD_bind; RNA polymerase II-binding domain

    2. XM_002801115.3 → XP_002801161.2  calcium homeostasis endoplasmic reticulum protein isoform X1

      UniProtKB/TrEMBL
      A0A5F8ASR2, F7GVS3
      Related
      ENSMMUP00000079945.1, ENSMMUT00000085311.1
      Conserved Domains (5) summary
      PHA03377
      Location:530 → 693
      PHA03377; EBNA-3C; Provisional
      smart00648
      Location:13 → 65
      SWAP; Suppressor-of-White-APricot splicing regulator
      PRK14086
      Location:386 → 567
      dnaA; chromosomal replication initiator protein DnaA
      pfam01585
      Location:853 → 898
      G-patch; G-patch domain
      pfam04818
      Location:160 → 292
      CTD_bind; RNA polymerase II-binding domain
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials