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    AFAP1 actin filament associated protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709419, updated on 17-Aug-2024

    Summary

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    Official Symbol
    AFAP1provided by VGNC
    Official Full Name
    actin filament associated protein 1provided by VGNC
    Primary source
    VGNC:VGNC:100199
    Locus tag
    EGK_15540
    See related
    Ensembl:ENSMMUG00000043581
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See AFAP1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (5001341..5192766)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (8018190..8206905, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678232 Neighboring gene actin binding LIM protein family member 2 Neighboring gene collagen alpha-1(I) chain Neighboring gene microRNA mir-95 Neighboring gene sortilin related VPS10 domain containing receptor 2 Neighboring gene prosaposin like 1 Neighboring gene uncharacterized LOC114678233 Neighboring gene uncharacterized LOC106998244

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SH2 domain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables SH3 domain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    actin filament-associated protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      5001341..5192766
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015137960.2 → XP_014993446.2  actin filament-associated protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8ASF0, G7MSH4
      Conserved Domains (3) summary
      PRK02224
      Location:645 → 730
      PRK02224; chromosome segregation protein; Provisional
      cd13306
      Location:143 → 249
      PH1_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 1
      cd13307
      Location:347 → 447
      PH2_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 2

    2. XM_015137961.2 → XP_014993447.2  actin filament-associated protein 1 isoform X2

      UniProtKB/TrEMBL
      H9FMR3
      Conserved Domains (3) summary
      PRK02224
      Location:579 → 664
      PRK02224; chromosome segregation protein; Provisional
      cd13306
      Location:143 → 249
      PH1_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 1
      cd13307
      Location:347 → 447
      PH2_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 2

    3. XM_015137962.2 → XP_014993448.2  actin filament-associated protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8A5Z6, H9FMR3
      Related
      ENSMMUP00000072338.1, ENSMMUT00000094075.1
      Conserved Domains (3) summary
      PRK02224
      Location:561 → 646
      PRK02224; chromosome segregation protein; Provisional
      cd13306
      Location:143 → 249
      PH1_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 1
      cd13307
      Location:347 → 447
      PH2_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 2

    4. XM_028848323.1 → XP_028704156.1  actin filament-associated protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8ASF0, G7MSH4
      Related
      ENSMMUP00000079830.1, ENSMMUT00000101457.1
      Conserved Domains (3) summary
      PRK02224
      Location:645 → 730
      PRK02224; chromosome segregation protein; Provisional
      cd13306
      Location:143 → 249
      PH1_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 1
      cd13307
      Location:347 → 447
      PH2_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 2
    Nucleotide Protein
    Heading Accession and Version

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