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    TNFRSF13C TNF receptor superfamily member 13C [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712577, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TNFRSF13Cprovided by VGNC
    Official Full Name
    TNF receptor superfamily member 13Cprovided by VGNC
    Primary source
    VGNC:VGNC:108067
    See related
    Ensembl:ENSMMUG00000052011
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TNFRSF13C in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (9579888..9581721)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (84015340..84017166, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene septin 3 Neighboring gene centromere protein M Neighboring gene shisa family member 8 Neighboring gene sterol regulatory element binding transcription factor 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in B cell costimulation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in T cell costimulation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of B cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tumor necrosis factor-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tumor necrosis factor receptor superfamily member 13C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      9579888..9581721
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001101623.4 → XP_001101623.2  tumor necrosis factor receptor superfamily member 13C

      See identical proteins and their annotated locations for XP_001101623.2

      UniProtKB/TrEMBL
      A0A5F7ZFG6
      Related
      ENSMMUP00000064362.1, ENSMMUT00000108672.1
      Conserved Domains (2) summary
      pfam09256
      Location:16 → 45
      BaffR-Tall_bind; BAFF-R, TALL-1 binding
      cl22855
      Location:159 → 178
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    Nucleotide Protein
    Heading Accession and Version

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