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    AMIGO3 adhesion molecule with Ig like domain 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705693, updated on 17-Aug-2024

    Summary

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    Official Symbol
    AMIGO3provided by VGNC
    Official Full Name
    adhesion molecule with Ig like domain 3provided by VGNC
    Primary source
    VGNC:VGNC:69681
    See related
    Ensembl:ENSMMUG00000014582
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See AMIGO3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (105832773..105835731, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (92615703..92619354)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene acylaminoacyl-peptide hydrolase Neighboring gene macrophage stimulating 1 Neighboring gene ring finger protein 123 Neighboring gene GDP-mannose pyrophosphorylase B Neighboring gene inositol hexakisphosphate kinase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    amphoterin-induced protein 3
    XP_001107400.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      105832773..105835731 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001107400.4 → XP_001107400.1  amphoterin-induced protein 3

      See identical proteins and their annotated locations for XP_001107400.1

      UniProtKB/TrEMBL
      F7GRK0
      Related
      ENSMMUP00000019146.2, ENSMMUT00000020455.4
      Conserved Domains (5) summary
      smart00410
      Location:286 → 371
      IG_like; Immunoglobulin like
      cd00116
      Location:45 → 221
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:45 → 65
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:86 → 145
      LRR_8; Leucine rich repeat
      cl11960
      Location:292 → 355
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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