U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RAI1 retinoic acid induced 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699215, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RAI1provided by VGNC
    Official Full Name
    retinoic acid induced 1provided by VGNC
    Primary source
    VGNC:VGNC:76651
    See related
    Ensembl:ENSMMUG00000023377
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RAI1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (17508563..17639321)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (17819609..17951439)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene phosphatidylethanolamine N-methyltransferase Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106993928 Neighboring gene uncharacterized LOC114673070 Neighboring gene sterol regulatory element binding transcription factor 1 Neighboring gene microRNA mir-33b

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in circadian regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    retinoic acid-induced protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      17508563..17639321
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001091010.4 → XP_001091010.3  retinoic acid-induced protein 1

      UniProtKB/TrEMBL
      A0A5F8AFG1, F7E488
      Related
      ENSMMUP00000030774.4, ENSMMUT00000032891.4
      Conserved Domains (3) summary
      PTZ00449
      Location:1259 → 1601
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      PHA03247
      Location:960 → 1362
      PHA03247; large tegument protein UL36; Provisional
      cl22851
      Location:1688 → 1903
      PHD_SF; PHD finger superfamily

    2. XM_028836065.1 → XP_028691898.1  retinoic acid-induced protein 1

      UniProtKB/TrEMBL
      A0A5F8AFG1, F7E488
      Conserved Domains (3) summary
      PTZ00449
      Location:1259 → 1601
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      PHA03247
      Location:960 → 1362
      PHA03247; large tegument protein UL36; Provisional
      cl22851
      Location:1688 → 1903
      PHD_SF; PHD finger superfamily

    3. XM_028836064.1 → XP_028691897.1  retinoic acid-induced protein 1

      UniProtKB/TrEMBL
      A0A5F8AFG1, F7E488
      Conserved Domains (3) summary
      PTZ00449
      Location:1259 → 1601
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      PHA03247
      Location:960 → 1362
      PHA03247; large tegument protein UL36; Provisional
      cl22851
      Location:1688 → 1903
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials