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    MED1 mediator complex subunit 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697781, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MED1provided by VGNC
    Official Full Name
    mediator complex subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:74724
    See related
    Ensembl:ENSMMUG00000009132
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    PPARBP
    Orthologs
    human mouse all
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    Genomic context

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    See MED1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (50518826..50569500, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (45184200..45234263, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene transcription factor CP2-like protein 1 Neighboring gene F-box and leucine rich repeat protein 20 Neighboring gene cytochrome c oxidase subunit 7C, mitochondrial pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene cyclin dependent kinase 12 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear retinoic acid receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear thyroid hormone receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear vitamin D receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to thyroid hormone stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mediator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mediator of RNA polymerase II transcription subunit 1
    Names
    peroxisome proliferator-activated receptor binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      50518826..50569500 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015119526.2 → XP_014975012.1  mediator of RNA polymerase II transcription subunit 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZA20, H9FW47
      Related
      ENSMMUP00000068449.1, ENSMMUT00000104917.1
      Conserved Domains (1) summary
      pfam10744
      Location:60 → 426
      Med1; Mediator of RNA polymerase II transcription subunit 1

    2. XM_015119528.2 → XP_014975014.1  mediator of RNA polymerase II transcription subunit 1 isoform X3

      UniProtKB/TrEMBL
      G7NH37
      Conserved Domains (1) summary
      pfam10744
      Location:1 → 254
      Med1; Mediator of RNA polymerase II transcription subunit 1

    3. XM_028836446.1 → XP_028692279.1  mediator of RNA polymerase II transcription subunit 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZA20
      Conserved Domains (1) summary
      pfam10744
      Location:1 → 350
      Med1; Mediator of RNA polymerase II transcription subunit 1
    Nucleotide Protein
    Heading Accession and Version

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