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    PHF21A PHD finger protein 21A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714798, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PHF21Aprovided by VGNC
    Official Full Name
    PHD finger protein 21Aprovided by VGNC
    Primary source
    VGNC:VGNC:75855
    Locus tag
    EGK_06314
    See related
    Ensembl:ENSMMUG00000002617
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
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    Genomic context

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    See PHF21A in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (19651689..19845167)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (19930319..20125309)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene filamin-binding LIM protein 1 pseudogene Neighboring gene uncharacterized LOC114672267 Neighboring gene LARGE xylosyl- and glucuronyltransferase 2 Neighboring gene peroxisomal biogenesis factor 16

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of histone deacetylase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PHD finger protein 21A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265672.1 → NP_001252601.1  PHD finger protein 21A

      See identical proteins and their annotated locations for NP_001252601.1

      Status: PROVISIONAL

      Source sequence(s)
      JV565134
      UniProtKB/TrEMBL
      F7H7D4, F7H7E3
      Related
      ENSMMUP00000003518.2, ENSMMUT00000003724.4
      Conserved Domains (2) summary
      COG5034
      Location:329 → 490
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:444 → 486
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      19651689..19845167
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028832743.1 → XP_028688576.1  PHD finger protein 21A isoform X3

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:381 → 543
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:497 → 539
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    2. XM_028832738.1 → XP_028688571.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    3. XM_028832737.1 → XP_028688570.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    4. XM_028832739.1 → XP_028688572.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    5. XM_028832744.1 → XP_028688577.1  PHD finger protein 21A isoform X4

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:380 → 542
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:496 → 538
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    6. XM_028832760.1 → XP_028688593.1  PHD finger protein 21A isoform X16

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:297 → 459
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:413 → 455
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    7. XM_015114213.2 → XP_014969699.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    8. XM_028832748.1 → XP_028688581.1  PHD finger protein 21A isoform X9

      UniProtKB/TrEMBL
      F7H7D4
      Conserved Domains (2) summary
      COG5034
      Location:336 → 497
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:451 → 493
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    9. XM_028832736.1 → XP_028688569.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    10. XM_015114207.2 → XP_014969693.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    11. XM_028832742.1 → XP_028688575.1  PHD finger protein 21A isoform X2

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:381 → 543
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:497 → 539
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    12. XM_028832749.1 → XP_028688582.1  PHD finger protein 21A isoform X10

      UniProtKB/TrEMBL
      F7H7D4
      Conserved Domains (3) summary
      COG5034
      Location:335 → 496
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:450 → 492
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)
      pfam01017
      Location:3 → 69
      STAT_alpha; STAT protein, all-alpha domain

    13. XM_028832750.1 → XP_028688583.1  PHD finger protein 21A isoform X11

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:330 → 492
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:446 → 488
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    14. XM_028832758.1 → XP_028688591.1  PHD finger protein 21A isoform X14

      UniProtKB/TrEMBL
      F7H7D4
      Conserved Domains (2) summary
      COG5034
      Location:328 → 489
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:443 → 485
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    15. XM_028832754.1 → XP_028688587.1  PHD finger protein 21A isoform X14

      UniProtKB/TrEMBL
      F7H7D4
      Conserved Domains (2) summary
      COG5034
      Location:328 → 489
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:443 → 485
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    16. XM_028832746.1 → XP_028688579.1  PHD finger protein 21A isoform X7

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:374 → 536
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:490 → 532
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    17. XM_028832747.1 → XP_028688580.1  PHD finger protein 21A isoform X8

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (3) summary
      COG5034
      Location:373 → 535
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:489 → 531
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)
      pfam01017
      Location:3 → 62
      STAT_alpha; STAT protein, all-alpha domain

    18. XM_015114229.2 → XP_014969715.1  PHD finger protein 21A isoform X7

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:374 → 536
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:490 → 532
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    19. XM_028832759.1 → XP_028688592.1  PHD finger protein 21A isoform X15

      UniProtKB/TrEMBL
      F7H7D4
      Conserved Domains (3) summary
      COG5034
      Location:327 → 488
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:442 → 484
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)
      pfam01017
      Location:3 → 62
      STAT_alpha; STAT protein, all-alpha domain

    20. XM_028832761.1 → XP_028688594.1  PHD finger protein 21A isoform X17

      UniProtKB/TrEMBL
      F7H7D4
      Conserved Domains (3) summary
      COG5034
      Location:244 → 405
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:359 → 401
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)
      pfam01017
      Location:3 → 62
      STAT_alpha; STAT protein, all-alpha domain

    21. XM_028832745.1 → XP_028688578.1  PHD finger protein 21A isoform X6

      UniProtKB/TrEMBL
      A0A1D5Q7L3, A0A5F7Z7E5, H9FVF2
      Related
      ENSMMUP00000044029.2, ENSMMUT00000053184.2
      Conserved Domains (3) summary
      COG5034
      Location:374 → 536
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:490 → 532
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)
      pfam01017
      Location:3 → 62
      STAT_alpha; STAT protein, all-alpha domain

    22. XM_028832753.1 → XP_028688586.1  PHD finger protein 21A isoform X13

      UniProtKB/TrEMBL
      F7H7D4, H9FVF3
      Conserved Domains (2) summary
      COG5034
      Location:328 → 489
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:443 → 485
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    23. XM_015114221.2 → XP_014969707.1  PHD finger protein 21A isoform X5

      UniProtKB/TrEMBL
      A0A1D5QT36, A0A5F7Z7E5, A0A5S6RDS9, A0A8J8XTU0, G7NDH5
      Conserved Domains (2) summary
      COG5034
      Location:375 → 537
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:491 → 533
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    24. XM_015114224.2 → XP_014969710.1  PHD finger protein 21A isoform X5

      UniProtKB/TrEMBL
      A0A1D5QT36, A0A5F7Z7E5, A0A5S6RDS9, A0A8J8XTU0, G7NDH5
      Conserved Domains (2) summary
      COG5034
      Location:375 → 537
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:491 → 533
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    25. XM_028832756.1 → XP_028688589.1  PHD finger protein 21A isoform X13

      UniProtKB/TrEMBL
      F7H7D4, H9FVF3
      Conserved Domains (2) summary
      COG5034
      Location:328 → 489
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:443 → 485
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    26. XM_015114225.2 → XP_014969711.1  PHD finger protein 21A isoform X5

      UniProtKB/TrEMBL
      A0A1D5QT36, A0A5F7Z7E5, A0A5S6RDS9, A0A8J8XTU0, G7NDH5
      Related
      ENSMMUP00000062471.1, ENSMMUT00000091961.1
      Conserved Domains (2) summary
      COG5034
      Location:375 → 537
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:491 → 533
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    27. XM_015114208.2 → XP_014969694.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    28. XM_028832740.1 → XP_028688573.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    29. XM_015114226.2 → XP_014969712.1  PHD finger protein 21A isoform X6

      UniProtKB/TrEMBL
      A0A1D5Q7L3, A0A5F7Z7E5, H9FVF2
      Conserved Domains (3) summary
      COG5034
      Location:374 → 536
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:490 → 532
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)
      pfam01017
      Location:3 → 62
      STAT_alpha; STAT protein, all-alpha domain

    30. XM_015114222.2 → XP_014969708.1  PHD finger protein 21A isoform X5

      UniProtKB/TrEMBL
      A0A1D5QT36, A0A5F7Z7E5, A0A5S6RDS9, A0A8J8XTU0, G7NDH5
      Conserved Domains (2) summary
      COG5034
      Location:375 → 537
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:491 → 533
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    31. XM_028832752.1 → XP_028688585.1  PHD finger protein 21A isoform X12

      UniProtKB/TrEMBL
      F7H7D4, F7H7E3
      Conserved Domains (2) summary
      COG5034
      Location:329 → 490
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:444 → 486
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    32. XM_015114206.2 → XP_014969692.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    33. XM_028832735.1 → XP_028688568.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    34. XM_028832755.1 → XP_028688588.1  PHD finger protein 21A isoform X14

      UniProtKB/TrEMBL
      F7H7D4
      Conserved Domains (2) summary
      COG5034
      Location:328 → 489
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:443 → 485
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    35. XM_015114223.2 → XP_014969709.1  PHD finger protein 21A isoform X5

      UniProtKB/TrEMBL
      A0A1D5QT36, A0A5F7Z7E5, A0A5S6RDS9, A0A8J8XTU0, G7NDH5
      Related
      ENSMMUP00000051215.2, ENSMMUT00000063517.2
      Conserved Domains (2) summary
      COG5034
      Location:375 → 537
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:491 → 533
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    36. XM_015114233.2 → XP_014969719.1  PHD finger protein 21A isoform X12

      UniProtKB/TrEMBL
      F7H7D4, F7H7E3
      Conserved Domains (2) summary
      COG5034
      Location:329 → 490
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:444 → 486
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    37. XM_015114215.2 → XP_014969701.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    38. XM_015114211.2 → XP_014969697.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    39. XM_028832734.1 → XP_028688567.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    40. XM_028832741.1 → XP_028688574.1  PHD finger protein 21A isoform X1

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Conserved Domains (2) summary
      COG5034
      Location:382 → 544
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:498 → 540
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    41. XM_028832751.1 → XP_028688584.1  PHD finger protein 21A isoform X11

      UniProtKB/TrEMBL
      A0A5F7Z7E5
      Related
      ENSMMUP00000061322.1, ENSMMUT00000104093.1
      Conserved Domains (2) summary
      COG5034
      Location:330 → 492
      TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
      cd15523
      Location:446 → 488
      PHD_PHF21A; PHD finger found in PHD finger protein 21A (PHF21A)

    RNA

    1. XR_003722318.1 RNA Sequence

    2. XR_003722319.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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