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    HTT huntingtin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700306, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HTTprovided by VGNC
    Official Full Name
    huntingtinprovided by VGNC
    Primary source
    VGNC:VGNC:73468
    See related
    Ensembl:ENSMMUG00000008392
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    HD
    Orthologs
    human mouse all
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    Genomic context

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    See HTT in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    67
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (3190699..3356988)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (3349677..3513694)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor kinase 4 Neighboring gene U6 spliceosomal RNA Neighboring gene U7 small nuclear RNA Neighboring gene Myb/SANT DNA binding domain containing 1 Neighboring gene regulator of G protein signaling 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in microtubule-based transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    huntingtin
    Names
    solute carrier family 6 (neurotransmitter transporter, serotonin), member 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      3190699..3356988
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028848247.1 → XP_028704080.1  huntingtin isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZCL9, A0A5F7ZNL7
      Related
      ENSMMUP00000063358.1, ENSMMUT00000102972.1
      Conserved Domains (2) summary
      sd00044
      Location:121 → 143
      HEAT; HEAT repeat [structural motif]
      pfam12372
      Location:1503 → 1541
      DUF3652; Huntingtin protein region

    2. XM_028848248.1 → XP_028704081.1  huntingtin isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZNJ1, A0A5F8A003
      Related
      ENSMMUP00000067182.1, ENSMMUT00000088266.1
      Conserved Domains (2) summary
      sd00044
      Location:121 → 143
      HEAT; HEAT repeat [structural motif]
      pfam12372
      Location:1454 → 1492
      DUF3652; Huntingtin protein region
    Nucleotide Protein
    Heading Accession and Version

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