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    LRRC42 leucine rich repeat containing 42 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714839, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LRRC42provided by VGNC
    Official Full Name
    leucine rich repeat containing 42provided by VGNC
    Primary source
    VGNC:VGNC:74385
    See related
    Ensembl:ENSMMUG00000007182
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LRRC42 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (170450277..170472219, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (53621139..53643424)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene low density lipoprotein receptor class A domain containing 1 Neighboring gene heterogeneous nuclear ribonucleoprotein A3-like Neighboring gene intraflagellar transport 25 Neighboring gene iodothyronine deiodinase 1 Neighboring gene Yip1 domain family member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat-containing protein 42

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      170450277..170472219 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015140082.2 → XP_014995568.1  leucine-rich repeat-containing protein 42

      UniProtKB/TrEMBL
      A0A5F8AJ66, F7EVR3, H9ES15
      Conserved Domains (2) summary
      sd00034
      Location:175 → 202
      LRR_AMN1; leucine-rich repeat [structural motif]
      cl29113
      Location:167 → 272
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    2. XM_001113120.3 → XP_001113120.2  leucine-rich repeat-containing protein 42

      UniProtKB/TrEMBL
      A0A5F8AJ66, F7EVR3, H9ES15
      Related
      ENSMMUP00000009414.3, ENSMMUT00000010029.4
      Conserved Domains (2) summary
      sd00034
      Location:175 → 202
      LRR_AMN1; leucine-rich repeat [structural motif]
      cl29113
      Location:167 → 272
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    3. XM_028833562.1 → XP_028689395.1  leucine-rich repeat-containing protein 42

      UniProtKB/TrEMBL
      A0A5F8AJ66, F7EVR3, H9ES15
      Conserved Domains (2) summary
      sd00034
      Location:175 → 202
      LRR_AMN1; leucine-rich repeat [structural motif]
      cl29113
      Location:167 → 272
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    4. XM_001113152.4 → XP_001113152.2  leucine-rich repeat-containing protein 42

      UniProtKB/TrEMBL
      A0A5F8AJ66, F7EVR3, H9ES15
      Related
      ENSMMUP00000079278.1, ENSMMUT00000108885.1
      Conserved Domains (2) summary
      sd00034
      Location:175 → 202
      LRR_AMN1; leucine-rich repeat [structural motif]
      cl29113
      Location:167 → 272
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    Nucleotide Protein
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