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    PCDHB1 protocadherin beta 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699508, updated on 5-Mar-2024

    Summary

    Gene symbol
    PCDHB1
    Gene description
    protocadherin beta 1
    See related
    Ensembl:ENSMMUG00000014574
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
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    Genomic context

    See PCDHB1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (138432361..138434946)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (138817433..138820018)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene protocadherin alpha-C2 Neighboring gene protocadherin alpha-8 pseudogene Neighboring gene protocadherin alpha-4-like Neighboring gene uncharacterized LOC106998968 Neighboring gene protocadherin beta 2 Neighboring gene protocadherin beta 3

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193851.3NP_001180780.3  protocadherin beta-1

      Status: INFERRED

      Source sequence(s)
      QNVO02000388
      UniProtKB/TrEMBL
      A0A5K1V029, F7GRQ5, G7MV01
      Related
      ENSMMUP00000019137.4, ENSMMUT00000020446.4
      Conserved Domains (3) summary
      cd11304
      Location:246343
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam08266
      Location:30110
      Cadherin_2; Cadherin-like
      pfam16492
      Location:688772
      Cadherin_C_2; Cadherin cytoplasmic C-terminal

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      138432361..138434946
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)