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    TENM1 teneurin transmembrane protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699897, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TENM1provided by VGNC
    Official Full Name
    teneurin transmembrane protein 1provided by VGNC
    Primary source
    VGNC:VGNC:79969
    See related
    Ensembl:ENSMMUG00000007587
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    ODZ1
    Orthologs
    human mouse all
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    Genomic context

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    See TENM1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (120623472..120988658, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (118165237..118530163, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene TEX13 family member D Neighboring gene SH2 domain containing 1A Neighboring gene teneurin-1-like Neighboring gene microRNA mir-7207 Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell adhesion molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein homodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    teneurin-1
    Names
    odz, odd Oz/ten-m homolog 1
    odz, odd Oz/ten-m homolog 1(Drosophila)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      120623472..120988658 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015128153.2 → XP_014983639.1  teneurin-1

      UniProtKB/TrEMBL
      A0A1D5R531
      Related
      ENSMMUP00000055418.1, ENSMMUT00000058909.2
      Conserved Domains (10) summary
      COG3209
      Location:1585 → 2174
      RhsA; Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only]
      cd05819
      Location:977 → 1016
      NHL; NHL repeat [structural motif]
      TIGR01643
      Location:1632 → 1672
      YD_repeat_2x; YD repeat (two copies)
      TIGR03696
      Location:2126 → 2204
      Rhs_assc_core; RHS repeat-associated core domain
      pfam01500
      Location:309 → 512
      Keratin_B2; Keratin, high sulfur B2 protein
      pfam05593
      Location:1424 → 1458
      RHS_repeat; RHS Repeat
      pfam06484
      Location:19 → 97
      Ten_N; Teneurin Intracellular Region
      pfam07974
      Location:443 → 470
      EGF_2; EGF-like domain
      pfam15636
      Location:2430 → 2505
      Tox-GHH; GHH signature containing HNH/Endo VII superfamily nuclease toxin
      cl18310
      Location:948 → 1308
      NHL; NHL repeat unit of beta-propeller proteins
    Nucleotide Protein
    Heading Accession and Version

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