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    TRAPPC2 trafficking protein particle complex subunit 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711585, updated on 5-Mar-2024

    Summary

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    Gene symbol
    TRAPPC2
    Gene description
    trafficking protein particle complex subunit 2
    Locus tag
    EGK_11133
    See related
    Ensembl:ENSMMUG00000022619
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TRAPPC2 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (13374002..13394910, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (12931529..12952416, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene transcription elongation factor A N-terminal and central domain containing Neighboring gene RAB9A, member RAS oncogene family Neighboring gene OFD1 centriole and centriolar satellite protein Neighboring gene uncharacterized LOC114675102 Neighboring gene glycoprotein M6B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TRAPP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trafficking protein particle complex subunit 2
    Names
    trafficking protein particle complex 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      13374002..13394910 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126985.2 → XP_014982471.1  trafficking protein particle complex subunit 2

      UniProtKB/TrEMBL
      A0A8J8YFH6, F6Z6G0, F7BY58, G7MKT9, G7NNZ0
      Conserved Domains (1) summary
      cd14825
      Location:4 → 138
      TRAPPC2_sedlin; Trafficking protein particle complex subunit 2

    2. XM_001096697.4 → XP_001096697.1  trafficking protein particle complex subunit 2

      See identical proteins and their annotated locations for XP_001096697.1

      UniProtKB/TrEMBL
      A0A8J8YFH6, F6Z6G0, F7BY58, G7MKT9, G7NNZ0
      Related
      ENSMMUP00000029781.2, ENSMMUT00000031830.3
      Conserved Domains (1) summary
      cd14825
      Location:4 → 138
      TRAPPC2_sedlin; Trafficking protein particle complex subunit 2

    RNA

    1. XR_001441918.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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