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    EBF2 EBF transcription factor 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711674, updated on 17-Aug-2024

    Summary

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    Official Symbol
    EBF2provided by VGNC
    Official Full Name
    EBF transcription factor 2provided by VGNC
    Primary source
    VGNC:VGNC:83996
    Locus tag
    EGK_18787
    See related
    Ensembl:ENSMMUG00000005760
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See EBF2 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (26109898..26312042, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (25869757..26072016, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene potassium channel tetramerization domain containing 9 Neighboring gene cell division cycle associated 2 Neighboring gene uncharacterized LOC106999711 Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene small nuclear ribonucleoprotein Sm D2 pseudogene Neighboring gene protein phosphatase 2 regulatory subunit Balpha

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor COE2
    Names
    early B cell factor 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      26109898..26312042 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001108135.4 → XP_001108135.1  transcription factor COE2

      See identical proteins and their annotated locations for XP_001108135.1

      UniProtKB/TrEMBL
      A0A5S6RAQ8, A0A8J8YRL5, F6S1T9, F6W1L5, G7N0R0
      Related
      ENSMMUP00000007605.3, ENSMMUT00000008088.4
      Conserved Domains (3) summary
      cd01175
      Location:253 → 337
      IPT_COE; IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors. COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved ...
      pfam16422
      Location:20 → 246
      COE1_DBD; Transcription factor COE1 DNA-binding domain
      pfam16423
      Location:338 → 381
      COE1_HLH; Transcription factor COE1 helix-loop-helix domain
    Nucleotide Protein
    Heading Accession and Version

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