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    CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715516, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CRISPLD2provided by VGNC
    Official Full Name
    cysteine rich secretory protein LCCL domain containing 2provided by VGNC
    Primary source
    VGNC:VGNC:81379
    See related
    Ensembl:ENSMMUG00000011245
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CRISPLD2 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (71832692..71920179)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (69533558..69622408)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106995103 Neighboring gene ubiquitin specific peptidase 10 Neighboring gene interferon-induced transmembrane protein 3 pseudogene Neighboring gene zinc finger DHHC-type palmitoyltransferase 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cysteine-rich secretory protein LCCL domain-containing 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      71832692..71920179
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001112988.4 → XP_001112988.2  cysteine-rich secretory protein LCCL domain-containing 2 isoform X1

      UniProtKB/TrEMBL
      A0A5S6R7C5, A0A8J8XD60, F6WQC8, G7NPF6
      Related
      ENSMMUP00000014740.4, ENSMMUT00000015734.4
      Conserved Domains (3) summary
      smart00603
      Location:286 → 370
      LCCL; LCCL domain
      pfam03815
      Location:389 → 488
      LCCL; LCCL domain
      cl00133
      Location:56 → 201
      CAP; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family

    2. XM_015126725.2 → XP_014982211.2  cysteine-rich secretory protein LCCL domain-containing 2 isoform X2

      Conserved Domains (3) summary
      smart00603
      Location:285 → 369
      LCCL; LCCL domain
      pfam03815
      Location:388 → 487
      LCCL; LCCL domain
      cl00133
      Location:56 → 201
      CAP; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family
    Nucleotide Protein
    Heading Accession and Version

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