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    USP1 ubiquitin specific peptidase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695157, updated on 17-Aug-2024

    Summary

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    Official Symbol
    USP1provided by VGNC
    Official Full Name
    ubiquitin specific peptidase 1provided by VGNC
    Primary source
    VGNC:VGNC:78733
    Locus tag
    EGK_00834
    See related
    Ensembl:ENSMMUG00000002339
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See USP1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (161981631..161996638, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (62139525..62154465)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L13a pseudogene Neighboring gene dedicator of cytokinesis 7 Neighboring gene angiopoietin like 3 Neighboring gene bcl-2-binding component 3 Neighboring gene U6 spliceosomal RNA Neighboring gene KN motif and ankyrin repeat domains 4 Neighboring gene LINE1 type transposase domain containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin carboxyl-terminal hydrolase 1
    XP_001085998.3
    XP_014996564.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      161981631..161996638 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001085998.4 → XP_001085998.3  ubiquitin carboxyl-terminal hydrolase 1

      UniProtKB/TrEMBL
      A0A5F7ZKK6, A0A5K1U223, A0A8J8Y508, F7C644, G7MHB3
      Related
      ENSMMUP00000068092.1, ENSMMUT00000085268.1
      Conserved Domains (1) summary
      cd02671
      Location:58 → 599
      Peptidase_C19O; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...

    2. XM_015141078.1 → XP_014996564.1  ubiquitin carboxyl-terminal hydrolase 1

      UniProtKB/TrEMBL
      A0A5F7ZKK6, A0A5K1U223, A0A8J8Y508, F7C644, G7MHB3
      Related
      ENSMMUP00000066168.1, ENSMMUT00000091491.1
      Conserved Domains (1) summary
      cd02671
      Location:58 → 599
      Peptidase_C19O; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    Nucleotide Protein
    Heading Accession and Version

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