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    RPAP3 RNA polymerase II associated protein 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703749, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RPAP3provided by VGNC
    Official Full Name
    RNA polymerase II associated protein 3provided by VGNC
    Primary source
    VGNC:VGNC:76834
    See related
    Ensembl:ENSMMUG00000007482
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RPAP3 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (47212715..47256702, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (45877471..45921873, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA64/SNORA10 family Neighboring gene starch-binding domain-containing protein 1 pseudogene Neighboring gene uncharacterized LOC114670834 Neighboring gene endonuclease, poly(U) specific Neighboring gene Rap guanine nucleotide exchange factor 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA polymerase II-associated protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257451.1 → NP_001244380.1  RNA polymerase II-associated protein 3

      See identical proteins and their annotated locations for NP_001244380.1

      Status: PROVISIONAL

      Source sequence(s)
      JU336399
      UniProtKB/TrEMBL
      F6QTD8, F7H693
      Related
      ENSMMUP00000039888.2, ENSMMUT00000046859.3
      Conserved Domains (6) summary
      smart00028
      Location:133 → 166
      TPR; Tetratricopeptide repeats
      sd00006
      Location:133 → 161
      TPR; TPR repeat [structural motif]
      pfam00515
      Location:202 → 234
      TPR_1; Tetratricopeptide repeat
      pfam13414
      Location:132 → 197
      TPR_11; TPR repeat
      pfam13432
      Location:173 → 234
      TPR_16; Tetratricopeptide repeat
      pfam13877
      Location:546 → 636
      RPAP3_C; Potential Monad-binding region of RPAP3

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      47212715..47256702 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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